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This section provides some interesting information on various research and applications that have been published using StellarNet miniature spectrometers in the UV-VIS-NIR regionMany of the abstracts link to full page pdf articles and others contain links to other websites that host the material. If you have an interesting application that you would like to share with us, please send your article to ContactUs@stellarnet.us.

 
   
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Harding Flying Bison
Harding University- Edmond Wilson, Ethan Lilly, Eric, Locke, and David Stair
The goal of this mission is to measure the absorption spectrum of Earth's atmosphere as a function of altitude using a mini-spectrometer as a science payload onboard a NASA Terrier-Orion rocket that will reach an altitude of 72 miles, the edge of the atmosphere.

Recent technology has produced mini-spectrometers that operate in the UV-VIS-NIR regions of the spectrum  that are compact, robust, lightweight, have no moving parts, and have low power requirements.  Here we propose to study the earths atmosphere in order to investigate if these mini-spectrometers would be useful for solar system exploration missions to learn about atmospheric compositions of other worlds.
  
The spectrometer measures atmospheric spectra through an optical port in the rocket airframe using Sunlight as the source. Science questions to be answered are (1) what is the variation of water vapor in Earth's atmosphere as a function of altitude? (2) What is the concentration of ozone as a function of altitude? (3) Can the presence of NO2, N2), CO, I2, OH in the Earth's atmosphere be detected with this instrument?


Spectrum obtained from our spectrometer at 297 feet elevation. "Solar" refers to pointing the spectrometer at the Sun while the "N.E. Blue Sky has the instrument pointing away from the Sun.  Water and oxygen spectral peaks are readily visible.

More updates on this project to come...


Quick link Recent Articles by Titles

Raman (and LIBS) Spectroscopy of Pillow Lavas from the Anaga zone–Tenerife Canary Island -September 2011

Dimerization and blue light regulation of PIF1 interacting bHLH proteins in Arabidopsis-September 2011

Hydrothermal fabrication of well-ordered ZnO nanowire arrays on Zn foil: room temperature ultraviolet nanolasers –September 2011

Battery-operated, argon–hydrogen microplasma on hybrid, postage stamp-sized plastic–quartz chips for elemental analysis of liquid microsamples using a portable optical emission spectrometer-September 2011

Photoluminescence waveguiding in CdSe and CdTe QDs–PMMA nanocomposite films- September 2011

Atmospheric Microplasma Jet: Spectroscopic Database Development and Analytical Results-September 2011

TiO2 absorption and scattering coefficients using Monte Carlo method and macroscopic balances in a photo-CREC unit-August 2011


Photosynthetic Consequences of Late Leaf Spot Differ between Two Peanut Cultivars with Variable Levels of Resistance-August 2011
 

Effects of trehalose and sorbitol on the activity and structure of Pseudomonas cepacia lipase: spectroscopic insight-July 2011

 

NON-DESTRUCTIVE VIS-NIR REFLECTANCE SPECTROMETRY FOR RED WINE GRAPE ANALYSIS-July 2011

Deposition of ZnO multilayer on LiNbO3 single crystals by DC-magnetron sputtering-July 2011
 

Optically thin composite resonant absorber at the near-infrared band: a polarization independent and spectrally broadband configuration –July 2011
 

BBX32, An Arabidopsis B-box Protein, Functions in Light Signaling by Suppressing HY5-Regulated Gene Expression And Interacting with STH2 –June 2011


Design Principles of FRET-Based Dye-Sensitized Solar Cells with Buried Quantum Dot Donors-June- 2011


Collective Character of Previtamin D cis-trans Isomerization in Liquid-Crystalline Matrices-June 2011
 

Surface modification of polytetrafluoroethylene film using single liquid electrode atmospheric-pressure glow discharge-June 2011


Luminescence Properties and Quenching Mechanisms of Ln (Tf2N) 3 Complexes in the Ionic Liquid bmpyr Tf2N-June 2011

Effect of fabrication parameters on morphological and optical properties of highly doped p-porous silicon -June 2011


Optical properties of the polycrystalline transparent Nd: YAG ceramics prepared by two-step sintering-May 2011.

Improvement of New Oil Crops for Kentucky-2010

Caracterización mediante Espectroscopía Raman y LIBS de la Composición Geoquímica del Nacimiento del Rio Tinto

Responses of the blister beetle Hycleus apicicornis to visual stimuli-April 2011

Runaway electron preionized diffuse discharges in atmospheric pressure with a point-to-plane gap in repetitive pulsed mode
-April 2011

Visible Attenuated Total Reflection (ATR): A New Technique for High-Strength Pigment Analyses - March 2011

Tar analysis from biomass gasification by means of online fluorescence spectroscopy- March 2011

Comparison of diode-side-pumped Nd:YAG and Nd:YAP laser-
-March 2011

Identification and Discrimination of Bacterial Strains by Laser Induced Breakdown Spectroscopy and Neural Networks- March 2011

A novel high-throughput in vivo molecular screen for shade avoidance mutants identifies a novel phyA mutation - March 2011

Comparison of visible and infrared spectrum of light sources-March 2011

Deactivation of A549 cancer cells in vitro by a dielectric barrier discharge plasma needle- March 2011

Fluorescent Illumination with High Red-to-far-red Ratio Improves Resistance of Cucumber Seedlings to Powdery Mildew - March 2011

Electrochemical texturing of Al-doped ZnO thin films for photovoltaic applications-
February 2011

Accurate color predictability based on a spectral retardance model of a twisted-nematic liquid-crystal display -
February 2011

Femtosecond OPO for CARS spectroscopy-
February 2011

Interferon-[ggr] links ultraviolet radiation to melanomagenesis in mice- January 2011

Kinetic and thermodynamic study of the reaction catalyzed by glucose-6-phosphate dehydrogenase with nicotinamide adenine dinucleotide
-January 2011

Microbial UV Fluence-Response Assessment using a Novel UV-LED Collimated Beam System
- December 2010

The potential of alternative lighting-systems to suppress pre-harvest sexual maturation of 1+ Atlantic salmon (Salmo salar) post-smolts reared in commercial sea cages
- December 2010

Aposematic Signal Variation Predicts Male-Male Interaction in Polymorphic Poison Frog - Nov 2010

Provitamin D Doped Silica and Polymeric Films: New Materials for UV Biosensor-
Oct 2010

Nano-Biomimetic Materials for the Detection of Chemical Agents in Gases, Aerosols, and Solutions- Oct 2010

Specific Light-Emitting Diodes Can Suppress Sporulation of Podosphaera pannosa on Greenhouse Roses- September 2010

The emerging roles of melanopsin in behavioral adaptation to light - August 30, 2010

Skin Lesions Classification with Optical Spectroscopy

SPECTRALLY RESOLVED SOLAR IRRADIANCE DERIVED FROM METEOSAT CLOUD INFORMATION -METHODS AND VALIDATION

Extinction Cross-Section Measurements of Bacillus globigii Aerosols

Investigation of the Effects of Soil Compaction in Cotton


Non-destructive measurement of moisture and soluble solids content of Mazafati date fruit by NIR spectroscopy

Detection of Fecal/Ingesta Contaminants on Poultry Processing Equipment Surfaces by Visible and NIR Reflectance

The MPSS is a multi-channel process control monitor used in semi-conductor fabrication and other real-time process applications.

A field-study of inducible molecular defenses, ultraviolet radiation, and melanomagenesis in natural Xiphophorus hybrids

SPECTRAL DIFFERENTIATION BETWEEN COPPER AND IRON COLORANTS IN GEM TOURMALINES


OH Emission Spectra of Hybrid Rocket Motors Using PMMA and HTPB

Synthesis of (SrLaF) FeAs superconducting films by pulsed laser deposition~ Relationship between photo excited lights and crystalline of the films

Agriculture, Food, and Forestry

NON-DESTRUCTIVE VIS-NIR REFLECTANCE SPECTROMETRY FOR RED WINE GRAPE ANALYSIS –July 2011
Michael Fadock –Thesis, University of Guelph
A novel non-destructive method of grape berry analysis is presented that uses reflected light to predict berry composition. The reflectance spectrum was collected using a diode array spectrometer (350 to 850 nm) over the 2009 and 2010 growing seasons. Partial least squares regression (PLSR) and support vector machine regression (SVMR) generated calibrations between reflected light and composition for five berry components, total soluble solids (°Brix), titratable acidity (TA), pH, total phenols, and anthocyanins. The reflectance data was decomposed using principal component analysis (PCA) and independent component analysis (ICA). Regression models were constructed using 10x10 fold cross validation subject to smoothing, differentiation, and normalization pretreatments. All generated models were validated on the alternate season using two model selection strategies: minimum root mean squared error of prediction (RMSEP), and the „oneSE
heuristic…Diffuse reflectance spectra for the composite berry samples were measured with a portable array spectrometer (Model EPP2000C-100, StellarNet Inc., Tampa, FL, USA) using the SpectraWiz® software supplied by the manufacturer.

 

 Figure 14: 2009-10 study instrumentation. From left to right: A – Spectrometer, B – Light Source, C – Sample Holder.

 

Figure 18 Average spectral reflection for 2009, 2010, and relative difference (left to right). Selected difference features highlighted at 750, 772, 820, and 850nm.


Photosynthetic Consequences of Late Leaf Spot Differ between Two Peanut Cultivars with Variable Levels of ResistanceAugust 2011
MP Singh, JE Erickson, KJ Boote, BL Tillman,  AHC van Bruggen, and JW Jones - CROP SCIENCE (51), 2011
Late leaf spot (LLS), caused by Cercosporidium personatum (Berk.& Curt.) Deighton, (telemorph = Mycosphaerella  berkeleyi  Jenk.) is among the most widespread and damaging foliar diseases (Nutter and Shokes, 1995) of peanut (Arachis hypogaea L.) in the southeastern United States. Pod yield losses of up to 50% have been reported when fungicides are not applied (Shokes and Culbreath, 1997). Consequently, regular and costly fungicide applications are currently used to minimize yield losses from LLS (Monfort et al., 2004; Woodward et al., 2008). In addition, breeding and selection for improved cultivars with moderate resistance to leaf spot have recently been used with integrated disease management practices to reduce inputs and production costs (Monfort et al., 2004; Woodward et al., 2008). However, LLS effects on peanut yield are often variable and do not always correlate with cultivar LLS resistance ratings (Singh et al., 2011). An improved understanding of the effects of LLS on leaf-level physiological responses could help to explain these variable yield responses and result in better identification of improved cultivars in breeding programs... leaf chlorophyll. Following extraction, 1 mL of solution was placed in a quartz cuvette and absorbance was measured at 647 and 664.5 nm with a spectropho-tometer(Model BW-VIS, StellarNet Inc., Tampa, FL).
View PDF.


 

IMPROVEMENT OF NEW OIL CROPS FOR KENTUCKY-2010
Jamboonsri Watchareewan-Doctoral Dissertations. Paper 120. University of Kentucky.
Three oil crops, chia (Salvia hispanica L.), flax (Linum usitatissimum  L.), and  castor (Ricinus communis  L.), were studied because of their nutritional and industrial  values. Chia and flax are rich in an ω3 fatty acid, α-linolenic acid, and castor is a very high oil producer and high in a hydroxy fatty acid. Ethyl methanesulfonate (EMS) and gamma rays were employed to mutagenize chia seeds to produce early flowering mutants. The M1 population was grown and induced to flower by short-day photoperiods.  The M2 population was planted in the field in Lexington, KY in 2008. Early flowering  plants were found 55 days after planting while non-mutagenized plants did not produce any flower buds until the 7th of October, 82 days after planting, at a daylength of 11 hours and 32 minutes. 0.012% of the EMS-treated M2 population and 0.024% of the gamma radiation-treated population flowered much earlier than the controls. M3 early flowering mutant lines were able to flower at photoperiods of 12-15 hours in a greenhouse. Selected lines produced flower buds on the 7th of July, 47 days after planting, at a daylength of 14 hours and 41 minutes in the field in Lexington, Kentucky…Light irradiance was measured by using the F400-VisNIR fiber optic cable (designed for a sensor) with the instrument (EPP2000 fiber optic spectrometer from StellarNet Inc.). View PDF.


The potential of alternative lighting-systems to suppress pre-harvest sexual maturation of 1+ Atlantic salmon (Salmo salar) post-smolts reared in commercial sea cagesDecember 2010
E Leclercq, JF Taylor, M Sprague and H.Migaud – Institute of Aquacultural Engineering.
The aim of this study was to compare the efficiency of new candidate lighting-technologies (50W ‘blue’ light-emitting-diode (B, λmax = 465 nm); 232 W ‘green’ hot cathode, (G, λmax = 546 nm); 400 W ‘red’ tungsten-halogen, (R, λmax = 667 to 740 nm)) against a standard 400 W ‘white’ metal-halide used as control technology (C, broad spectrum) at suppressing sexual maturation of 1+ Atlantic salmon (Salmo salar) in sea-cages. A total of seven experimental set-ups were tested on a commercial-scale in three trials using a standardised photoperiod regime in the form of continuous artificial-light (LL) applied from winter to summer solstice during the second year at sea. The experimental stocks were raised under an ambient thermal regime that was similar across all trials.


Fluorescent Illumination with High Red-to-far-red Ratio Improves Resistance of Cucumber Seedlings to Powdery Mildew -March
T Shibuya, K Itagaki, M Tojo, R Endo… - HORTSCIENCE, 2011
We investigated the effects of fluorescent illumination with a high red-to-far-red ratio (R:FR) on the resistance of cucumber (Cucumis sativus) seedlings to powderymildew fungus (Sphaerotheca cucurbitae; PM). Seedlings were grown at a photosynthetic photon flux (PPF) of300mmol_m–2_s–1 provided by fluorescent lampswith highR:FR light (R:FR =7.0; FLH) or low R:FR light (R:FR = 1.1; FLL) until cotyledons or the first foliage leaf were fully expanded. Spores of PM were then inoculated onto the leaves, and the seedlings were grown for 7 days (fromcotyledon stage) or 9 days (fromfoliage–leaf stage) under FLH. The number of PM colonies on FLH seedlings was 0.80· (cotyledons) and 0.62· (foliage leaves) the number on FLL seedlings. The reduction on the FLH seedlings was probably the result of changes in leaf morphological characteristics such as a thicker epidermal tissue as a result of the higher R:FR illumination. The number of PM colonies on cotyledons of the FLH seedlings was also smaller than that on seedlings grown under metal-halide lamps providing a spectrum similar to that of natural light (R:FR = 1.2). The ratio of red (600 to 700 nm) to far-red (700 to 800 nm) light of FLH was 7.0 and that of FLL was 1.1. The spectrum of FLH was similar to that of FLL, except in FR (Fig. 1). The spectra were measured with a spectrometer (BLK-CXR-SR; StellarNet, Tampa, FL). View PDF.


Fig. -Light spectra of lamps. FLH = fluorescent lamp with high red-to-far-red ratio (R:FR); FLL = fluorescent lamp with low R:FR; ML = metalhalide lamp that provides a spectrum similar to that of natural light. Relative photon fluxes per unit wavelength are expressed relative to the maximum. The R:FR was estimated by dividing the total photon flux from red light (600 to 700 nm) by that from far-red light (700 to 800 nm).


Specific Light-Emitting Diodes Can Suppress Sporulation of Podosphaera pannosa on Greenhouse Roses-September 2010
A. Suthaparan, S. Torre, A. Stensvand, M. L. Herrero, R. I. Pettersen, D. M. Gadoury, . R. Gislerød- Department of Plant and Environmental Sciences, Norwegian University of Life Sciences-Norwegian Institute for Agricultural and Environmental Research-Department of Plant Pathology and Plant-Microbe Biology, Cornell University
When rose plants bearing colonies of Podosphaera pannosa were placed in a wind tunnel, the number of conidia trapped was directly proportional to intensity of daylight-balanced (white) light from 5 to 150 μmol m–2 s–1. Illumination of samples using blue (420 to 520 nm) light-emitting diodes (LEDs) increased the number of conidia trapped by a factor of approximately 2.7 over white light but germination of conidia under blue light was reduced by approximately 16.5% compared with conidia germination under white light. The number of conidia trapped under far-red (>685 nm) LEDs was approximately 4.7 times higher than in white light, and 13.3 times higher than under red (575 to 675 nm) LEDs, and germination was not induced compared with white light. When mildewed plants were exposed to cycles of 18 h of white light followed by 6 h of blue, red, far-red light, or darkness, light from the red LEDs reduced the number of conidia trapped by approximately 88% compared with darkness or far-red light. Interrupting the above dark period with 1 h of light from red LEDs also reduced the number of conidia trapped, while a 1-h period of light from far-red following the 1 h of light from red LEDs nullified the suppressive effect of red light. Our results indicate that brief exposure to red light during the dark interval may be as effective as continuous illumination in suppressing powdery mildew in greenhouse rose plant (Rosa × hybrida). Read More


Investigation of the Effects of Soil Compaction in Cotton
S. S. Kulkarni, S. G. Bajwa, G. Huitink
Soil compaction can cause yield reductions in cotton (Gossypium hirsutum). This study investigated the effect of soil compaction on canopy spectral reflectance, soil electrical conductivity (EC), and cotton yield. Field experiments were conducted during 2003-2005 using a completely randomized block design with four soil compaction treatments. The treatments were no subsoiling (control); subsoiled, disked, and bedded (conventional); subsoiled and compacted (compaction I); and compacted with no subsoiling (compaction II). Field data were collected on soil resistance, canopy reflectance, soil EC, and cotton yield. Comparison of means showed differences between treatments in reflectance in 2003 and 2004, soil compaction parameters in 2004 and 2005, and soil EC and yield in 2005. The depth and thickness of the hardpan were significantly correlated to green NDVI on 16 September (R2 = 0.53) in 2003. Depth, average resistance of hard pan, and EC all showed relationships with yield in 2005. Their combination as independent variables could explain 65% of the variability in cotton yield in 2005. These results verified that compaction affected canopy reflectance and reduced cotton yield in Arkansas. The practical implications of the outcome of this study are the potential use of EC and canopy reflectance to infer crop yield and extent of soil compaction. However, a multi-site and multi-year study is necessary to confirm this possibility.... same locations. Cotton canopy reflectance was recorded using a spectroradiometer (BLACK-Comet, StellarNet, Inc). View PDF...

Plant Reflectance
Spectral reflectance from plants can indicates plant stress and predict growth rate

Non-destructive measurement of moisture and soluble solids content of Mazafati date fruit by NIR spectroscopy
Seyed Ahmad Mireei, Seyed Saeid Mohtasebi, Reza Massudi, Shahin Rafiee, Atoosa Sadat Arabanian, Annachiara Berardinelli- Department of Agricultural Machinery Engineering, Faculty of Agricultural Engineering and Technology, University of Tehran- Laser and Plasma Research Institute, Shahid Beheshti University,
The potential of Near-Infrared (NIR) spectroscopy technique was assessed to predict moisture and soluble solids content of
Mazafati date fruit. Spectral acquisitions were carried out during four main ripening stages (Kimri, Khalal, Rutab and Tamr)
using a fast, non-scanning spectrometer in the interactance mode. Two different preprocessing methods; vector normalization
and multiplicative scatter correction, and wavelength regions (900- 1700 nm and 1332- 1641 nm) were used to build partial
least squares (PLS) regression models. The best predictive models showed coefficient of determination (R2) values of 0.980
and 0.966 for the moisture and the soluble solids content respectively; the relative residual predictive deviation (RPD) values
were 7.1 and 4.8. NIR spectroscopy appeared to be a good method for the assessment of maturity of the analyzed date
variety. View PDF
      
  
A schematic of the SNIR instrument set up and Raw absorption spectra (mean value) of Mazafati dates in Kimri, Khalal, Rutab and Tamr ripening stages


USE OF GROUND-BASED CANOPY REFLECTANCE TO DETERMINE RADIATION CAPTURE, NITROGEN AND WATER STATUS, AND FINAL YIELD IN WHEAT
Glen L. Ritchie
We quantified the spectral reflectance characteristics of hard red spring wheat (Triticum aestivum cv. Westbred 936) in research plots subjected to either nitrogen or water stress in a two year study. Both types of stress reduced ground cover, which was evaluated by digital photography and compared with ten spectral reflectance indices. On plots with a similar soil background, simple indices such as the normalized difference vegetation index, ratio vegetation index, and difference vegetation index were equal to or superior to more complex vegetation indices for predicting ground cover. Yield was estimated by ivintegrating the normalized difference vegetation index over the growing season. The coefficient of determination (r2) between integrated normalized difference vegetation index and final yield was 0.86. Read more...
       
Typical visible and NIR plant reflectance. Spectral features at 500 nm, 550 nm, 675 nm, and the red edge (about 690 to 750 nm) are controlled by chlorophyll concentration, while reflectance at 970 nm is related to water concentration. And Using the linear nature of soil reflectance to eliminate soil background signal using derivatives of reflectance spectra (right).

Spectrometer mounting design for summer 2002 tests. A rigid swing arm positioned the spectrometer over the canopy away from the wheelbarrow.


Detection of Fecal/Ingesta Contaminants on Poultry Processing Equipment Surfaces by Visible and NIR Reflectance
Spectroscopy

K. Chao, X. Nou, Y. Liu, M. S. Kim, D. E. Chan, C.-C. Yang, J. Patel, M. Sharma
Visible and near infrared (NIR) spectra and samples for laboratory microbial analysis were acquired of fecal
contaminants, ingesta contaminants, and bare processing equipment surfaces (rubber and stainless steel) in a commercial
poultry processing plant. Spectra were analyzed in the visible region of 450 to 748 nm and the NIR region of 920 to 1680 nm and microbial sampling for Enterobacteriaceae counts (EBC) was conducted for 82 fecal contaminant samples, 59 ingesta contaminant samples, 40 bare rubber belt areas, and 40 bare stainless steel areas. Two wavelength band ratios in the visible and NIR regions were selected for separating contaminants from equipment areas. Principal component analysis (PCA) was performed to analyze the spectral data set and 2 class soft independent modeling of class analogy (SIMCA) models were developed for comparison with band ratio classification. Fecal and ingesta contaminants were difficult to separate from each other but both were easily differentiated from the equipment areas. The visible ratio using 518 and 576 nm correctly classified 100% of contaminant samples and 92.5% of equipment area samples. The NIR ratio using 1565 and 1645 nm correctly classified 100% of the contaminant samples and 95% of the equipment area samples. Microbiological analysis found the highest EBC levels for fecal contaminants; mean EBC for ingesta contaminants was significantly lower than that for fecal contaminants. The high EBC levels for fecal contaminants indicate that these contaminants should be targeted for spectral based detection methods for sanitation monitoring and verification purposes; although their EBC levels are significantly lower, ingesta contaminants should also be included due to difficulty of separation from fecal contaminants. Download pdf
                          
Two portable battery powered spectrometer systems were used to collect the reflectance spectra in the visible (400-900 nm) and NIR (900-1700 nm) regions (fig. 1). For measuring visible spectra, a EPP2000-CXR (now BLACK-Comet CXR) spectrometer was used with an SL1 tungsten-krypton fiber-optic light source. For measuring NIR spectra, a EPP2000-InGaAs spectrometer (now RED-Wave Spectrometers) was used with a duplicate SL1 light source unit and a bifurcated fiber-optic probe

Comparison of visible and near infrared reflectance spectroscopy for the detection of faeces/ingesta contaminants for sanitation verification at slaughter plants

Surface Characterization of Weathered Wood-Plastic Composites Produced from Modified Wood Flour
James S. Fabiyi, Armando G. McDonald, and Nicole M. Stark
The effects of weathering on the surface properties of wood-plastic composites (WPC) were examined. High-density polyethylene (HDPE) based WPCs made from modified wood flour (untreated, extractives free, and holocellulose (delignified) fibers) were subjected to accelerated (xenon-arc) weathering. Colorimetery and Fourier-transform infrared spectroscopy were employed to monitor the color change and surface chemistries of the weathered WPC surface. The compositional change that occurred on the WPC surface was determined using pyrolysis GC-MS analysis. The study showed that longer exposure time caused higher oxidation, lower wood lignin and higher plastic content of the weathered WPC surface. From this study, the use of holocellulose fibers improved the weathering performance (color) of WPCs. Download pdf



Initial high-temperature schedule to reduce drying time and control kiln brown stain in ponderosa pine shop lumber
The surface color and lightness of rough green and dry fleshly planed boards were determined using a StellarNet Spectrometers.
Read more...


A fiber optic sensor measures percent soluble solids in onions for a big pay off at market time
Interesting and valuable information is available in the NIR spectral region for many agricultural products.  This application uses a NIR spectrometer to measure the percent of soluble solids in an onion by simply shining a light thru it!  This allows non-destructive determination of a harvest.


Environmental and Ecology

Raman Spectroscopy of Pillow Lavas from the Anaga zone–Tenerife Canary Island-September 2011
E Lalla, As Caramazana, As Arrana, et al. -Journal of the Spanish Society of Mineralogy
S
ome lava deposits have been reported on Mars by Martinez-Alonso et al (2008), showing similar characteristics to those of terrestrial pillow lavas. Pillow Lavas are an unequivocal sign of volcanism in an aqueous environment. Pillows are found in a wide variety of shapes including near-spherical bulbous pillows, flattened pillows, elongate and tubular pillows, and trapdoor pillows. They are probably the most abundant lava structural type on Earth. However, this kind of structure shares a concentric geometry and large central cavities, butthey have differences in mineralogy, on the degree of crystallization, and the jointing. The main reason is that the interiors cool more slowly than the quenched glass rind, being more crystalline. Progressive crystallization at slower cooling rates toward the interior produces a variety of rock textures, and the interiors of large pillows may be almost entirely crystalline (Kenish et al.,1998). Studying and understanding the pillows lavas could help us to understand the past of Mars... The detection was performed with a CCD Andor DV420A- OE-130. Furthermore XRD (with XRD diffractometer Philips PW1710), IR- Spectroscopy (PerkinElmer Spectrum 100 FT-IR spectrometer) and LIBS (Porta-Libs from Stellar Net) were used. View PDF.

 

fig 5. Laser Induced Breakdown Spectrometry of Pillow Lava Sample. On the Spectra is only shown the most intense peaks. (1) Brown External Face (2) White External Face (3) Red-Brown Internal Face


Responses of the blister beetle Hycleus apicicornis to visual stimuli-April 2011
LN LEBESA, ZR KHAN, A HASSANALI… - Physiological Entomology
Insect attraction to host plants may be partly mediated by visual stimuli. In the present study, the responses of adult Hycleus apicicornis(Guér.) (Coleoptera: Meloidae) to plant models of different colours, different combinations of two colours, or three hues of blue of different shapes are compared. Single-colour models comprised the colours sky blue, bright green, yellow, red, white and black. Sky blue (reflecting light in the 440–500 nm region) is the most attractive, followed by white, which reflects light over a broader range (400–700 nm). On landing on sky blue targets, beetles exhibit feeding behaviour immediately. When different hues of blue (of different shapes) are compared, sky blue is preferred over turquoise, followed by dark blue, indicating that H. apicicornis is more attracted to lighter hues of blue than to darker ones. No significant differences are found between the three shapes (circle, square and triangle) tested, suggesting that reflectance associated with colour could be a more important visual cue than shape for host location by H. apicicornis. The preference ofH. apicicornis for sky blue can be exploited in designing an attractive trap for its management.The reflectance spectra of the coloured inks on white paper and of the white paper on which they had been printed, were measured using a Stellarnet EPP2000C spectroradiometer (Stellarnet Inc., Oldsmar, Florida; calibrated to an operating range of 300–850 nm). View PDF.

Aposematic Signal Variation Predicts Male-Male Interaction in Polymorphic Poison Frog- Nov 2010
Laura Crothers, Eben Gering, Molly Cummings- International Journal of Organic Evolution
Many species use conspicuous “aposematic” signals to communicate unpalatability/unprofitability to potential predators. Although aposematic traits are generally considered to be classic examples of evolution by natural selection, they can also function in the context of sexual selection, and therefore comprise exceptional systems for understanding how conspicuous signals evolve under multifarious selection. We used males from a highly territorial poison frog species in a dichotomous choice behavioral test to conduct the first examination of how aposematic signal variation influences male–male interactions. Our results reveal two behavioral patterns: (1) male dorsal brightness influences the behaviors of male conspecifics such that males approach and call to brighter males more frequently and (2) a male's dorsal brightness predicts his own behavior such that bright males approach stimulus frogs faster, direct more calls to bright stimulus frogs, and exhibit lower advertising call pulse rates (a fitness-related trait). These findings indicate the potential for sexual selection by male–male competition to impact aposematic signal evolution.


In Vitro Model of Vitamin D Synthesis by UV Radiation in an Australian Urban Environment -Nov 2010
Alex Mc Kinley, Monika Janda, Josephine Auster, Michael Kimlin
Vitamin D, an important constituent of human health, is produced through exposure of human skin to short wave (280–315 nm) ultraviolet radiation (UV). We aimed to establish whether an urbanized environment with tall buildings in close proximity (an ‘urban canyon’) significantly reduced the capacity of sunlight to synthesize vitamin D, when compared to a typical suburban area (∼2.5 km away); and to investigate the association of UV and vitamin D production with pollution, temperature, and humidity. Measurements of ambient UV (295–400 nm) (using a portable photometer/radiometer and detector) and synthesized vitamin D (from an in vitro model) were taken regularly at urban and control sites over three months in Brisbane, Australia. During a typical 20-minute measurement, urban and control sites received 0.26 and 1.03 W/m2 mean total UV respectively (p<0.001), and produced 0.12 and 0.53 μg/mL mean vitamin D (p<0.001). Pollution, temperature and humidity were not associated with UV or vitamin D production. This demonstrates a large difference in vitamin D synthesis between an urban canyon and a nearby control site. Although the results cannot be directly applied to humans, they emphasize the need for further study of human vitamin D production in urban environments.

SPECTRALLY RESOLVED SOLAR IRRADIANCE DERIVED FROM METEOSAT CLOUD INFORMATION -METHODS AND VALIDATION
Jethro Betcke, Tanja Behrendt, Jan Kühnert, Annette Hammer, Elke Lorenz, Detlev Heinemann
Carl von Ossietzky University Oldenburg, Energy and Semiconductor Laboratory, Energy Meteorology Group
The varying spectral distribution of the terrestrial irradiance can cause significant differences between the actual and the rated efficiency of solar cells. To account for this effect it is necessary to calculate the weighted irradiance which depends on the solar cell spectral response and on the spectral distribution of the irradiance. Because ground based spectral measurements are sparse, satellite based spectral data can provide a good alternative. In this work we have compared two approaches. The SOLIS method can calculate both broadband and spectrally resolved terrestrial solar irradiance from satellite data. The clear sky module of SOLIS is based on a partial parametriation of radiative transfer calculations, and uses atmospheric data from climatologies or satellite based methods. The cloud module is based on empirical relationships between the cloud albedo values determined from Meteosat visual channels and the cloud transmittance. In parallel we developed a simpler empirical method, that can be more easily implemented in photovoltaic modeling software. It is based on principal component analysis of measured spectrally resolved irradiance and empirical relationships between the principal components and satellite derived clear sky index and sun elevation. Both methods have been validated using the same ground measured data from Stuttgart Germany. The weighted irradiance has been used as metrics to compare the results of the models. It was found that the use of both models gave a significant improvement compared to the use of a constant AM1.5 spectrum.  The use of the empirical model resulted in lower bias values, the use of SOLIS resulted in lower RMSE values. Apparatus used StellarNet BLACK-Comet, RED-Wave InGaS. View PDF…

 

 

The effect of metal halide and novel green cathode lights on the stress response, innate immunity, eye structure and feeding activity of Atlantic cod, Gadus morhua L. -2011
M Cowan, A Davie… - Aquaculture Research, 2011
High-intensity constant lighting is routinely used for photoperiod manipulation in the aquaculture industry in order to prevent early maturation. The potential welfare impacts of this technology, however, have not been extensively studied to date, and with the implementation of more efficient narrow bandwidth lighting technologies (cathode, light-emitting diodes), definitions of species-specific sensitivities are becoming essential. The objective of this study was to investigate the impact of traditional metal halide (MH) and novel green cathode lighting on the welfare (stress response, innate immunity, retina structure, feeding activity) and light perception of Atlantic cod. The results indicated that although acute responses to light were observed, there were no clear signicant long-term effects of any of the lighting treatments on the stress levels (plasma cortisol, glucose), innate immune function (lysozyme activity), retina structure and population feeding activity (acute decline under all light treatments, most pronounced in sh exposed to higher illumination, but normal feeding activity was resumed within 8 days following light onset). Regarding light perception, interestingly, even when subjected to high intensity constant lighting (MH mean tank intensity: 16.6Wm_2), cod still demonstrated a day-night rhythm in melatonin release, which suggests perception of the overlying ambient photoperiod.... Spectral content was recorded using a portable spectroradiometer (Model BLACK-Comet, Stellarnet, Tampa, FL, USA). Following acclimation, fish were randomly assigned to one of five light treatments (duplicated) for 4 weeks. View PDF.

Figure:  Normalized spectral profiles for (a) control fluorescent light, (b) cathode light and (c) metal halide light units.



A field-study of inducible molecular defenses, ultraviolet radiation, and melanomagenesis in natural Xiphophorus hybrids
Seth W. Coleman & Zachary W. Culumber & Ashley Meaders & Jennifer Henson & Gil G. Rosenthal
Ultraviolet radiation—the primary natural pollutant affecting melanomagenesis—may represent a widespread ecological stressor for many fishes, and yet the relationship between UV-exposure and stress has not been investigated in natural fish populations. Recent lab-based studies have sought to characterize the relationship between tumorigenesis and the induction of molecular defenses, such as heat shock proteins. Here we show that ultraviolet radiation and heat shock protein gene expression explain a significant amount of the variation in hyper-melanization—the phenotypic precursor to melanoma—in wild hybrids of Xiphophorus, laboratory models in cancer research.Our results suggest exposure to UV radiation causes stress which induces molecular defense mechanisms, which in turn may facilitate tumorigenesis in natural fish populations. Studies of laboratory-based model organisms in natural settings, like this one, may provide important insights into ecological and evolutionary relationships obscured in controlled laboratory environments. We hope that ours is only the first of many studies to investigate the such relationships between environmental stress, stress-induced molecular defenses, and cancer in fishes.
View PDF...

The relationship between incident solar irradiance across the UV range (units are divided by the interval—101 nm) and melanization among populations

Female Preferences for Aposematic Signal Components in a Polymorphic Poison Frog
Martine E. Maan and Molly E. Cummings, University of Texas at Austin, Integrative Biology
Aposematic signals may be subject to conflicting selective pressures from predators and conspecifics. We studied female preferences for different components of aposematic coloration in the polymorphic poison frog Oophaga pumilio across several phenotypically distinct populations.

Male reflectance spectra. Curves represent average reflectances
of all males used in the experiments. Gray areas indicate
between-individual variation (standard errors). Left panels
are dorsal reflectance spectra; right panels are ventral reflectance
spectra.


A private ultraviolet channel in visual communication
Molly E. Cummings, Gil G. Rosenthal and Michael J. Ryan- Section of Integrative Biology, University of Texas, Austin- Boston University Marine Program
Although private communication is considered an important diversifying force in evolution, there is little direct behavioural evidence to support this notion. Here, we show that ultraviolet (UV) signalling in northern swordtails (Xiphophorus) affords a channel for communication that is not accessible to their major predator, Astyanax mexicanus, the Mexican tetra. Laboratory and field behavioural experiments with swordtails (X. nigrensis) and predators (A. mexicanus) demonstrate that male UV ornamentation significantly increases their attractiveness to females but not to this predator, which is less sensitive to UV. UV reflectance among swordtail species correlates positively with tetra densities across habitats, and visual contrast estimates suggest that UV signals are highly conspicuous to swordtails in their natural environment. Cross-species comparisons also support the hypothesis that natural selection drives the use of UV communication. We compared two species, one with high (X. nigrensis) and one with low (X. malinche) Mexican tetra densities. Xiphophorus nigrensis males reflect significantly more UV than X. malinche, exhibit significant UV sexual dimorphism, and UV is a salient component of the sexual communication system. In X. malinche, however, males reflect minimally in the UV, there is no UV sexual dimorphism, and UV does not play a part in its communication system.

        



Mean spectral reflectance of Xiphophorus nigrensis
(a), and X. malinche (b), males (black lines) and females
(grey lines) for caudal (circles), ventral (diamonds), and
horizontal stripe (squares) body areas and male sword (solid
line). The dashed line at 400 nm represents the upper
boundary for UV wavelengths.


Remote Sensing Monitoring- Tallapoosa Watershed
John Glasier, Luoheng Han
Hyperspectral Reflectance Measurements of Chlorophyll Concentration and Related Water Quality Predictors
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StellarNet extreme Portability-EPP2000C is now called the BLACK-Comet and does not require external power (only your computers USB)!

Influence of plumage colour on prey response: does habitat alter heron crypsis to prey?
M. CLAY GREEN & PAUL L. LEBERG
The foraging strategies of wading birds may be influenced by their degree of crypsis to aquatic prey. White plumage has been hypothesized to be adaptive for herons hunting in open water habitats. We tested this hypothesis with laboratory and field experiments with multiple prey species. The foraging strategies of wading birds may be influenced by their degree of crypsis to aquatic prey. White plumage has been hypothesized to be adaptive for herons hunting in open water habitats. We tested this hypothesis with laboratory and field experiments with multiple prey species.Download pdf



SPECTRAL DIFFERENTIATION BETWEEN COPPER AND IRON COLORANTS IN GEM TOURMALINES
Paul B. Merkel and Christopher M. Breeding
The authors used Vis-NIR spectral measurements combined with LA-ICP-MS data to investigate the usefulness of absorption spectra for differentiating between copper and iron as sources of greenish blue coloration in gem tourmaline. While both Cu2+ and Fe2+ produce absorption bands with maxima near 700 nm, Cu2+ also has a strong band with a maximum near 900–925 nm, where absorption due to Fe2+ is typically at a minimum. In addition, Vis-NIR spectroscopy successfully identified Cu in pink/purple and violet stones that could be candidates for heat treatment. For the blue, green, and violet Cu-bearing tourmalines of pale-to-moderate color intensity in this study, weight percent of CuO could be estimated from the absorbance at 900 nm. This relatively inexpensive identification method may prove to be a valuable screening tool for Cubearing tourmaline. View PDF...
     
These Vis-NIR absorption spectra (collected with the EPP2000 spectrometer- now called the BLACK-Comet) are from green tourmalines colored primarily by Cu2+ (G3), Fe2+ (G2, G3), or V3+ (G8).

Benchtop vs. StellarNet miniature spectrometers-

For each sample, we determined specific gravity hydrostatically and measured refractive indices using a standard gemological refractometer. Vis-NIR spectra were collected with two different spectrometers. We analyzed most of the larger samples using a Perkin-Elmer Lambda 950 spectrometer equipped with a 150 mm integrating reflectance sphere, in the range 350–1150 nm. The gem was held (~5° from normal) in the jaws of center-mount sampling module PELA-9038, and the beam was directed through the table and reflected back off the pavilion facets. Smaller samples (<1 cm) could not be reliably measured with this configuration, because they did not completely intercept the beam. They were instead measured using a StellarNet EPP2000-CXR CCD array spectrometer with an SL1 tungsten-krypton light source and a R400-7-VisNIR bifurcated fiberoptic reflectance probe, in the range 400–900 nm. These smaller gems were usually placed table-down on a white reflective standard. The small tip of the fiber-optic probe, providing both the analyzing beam and the collection of transmitted light, was placed near the culet and aimed toward the table. The beam reflected off the white standard back through the table to the probe. Intensity measurements with and without the gem in place allowed absorbance to be determined. For both techniques, the approximate path of the analyzing beam consisted essentially of a dual traverse between the table and the culet. Both spectrometers provided absorbance vs. wavelength directly (uncorrected for path length). Spectral maxima of gems measured on both spectrometers were identical, and absorbance values were within ~10%.

Spectral Signatures of surface materials in pig buildings
Guoqiang Zhang and Jan S. Strom- Danish Institute of Agricultural Sciences
Spectral Signatures of the reflectance of visual and near infrared radiation are used to make statistically significant discrimination between clean and dirty pig building areas

Monitoring Birds- Black Phoebes
Dr. Esteban Fernández-Juricic, Assistant Professor, Department of Biological Sciences, Cal State Long Beach
For a bird to survive, it must be able to successfully find and eat food items.  Many factors can affect the ability of the bird to find food such as the habitat it lives in, the abundance of food, or how its visual system interprets images.  Birds are generally considered to have very good color vision.  In this study we explored how the Black Phoebe’s (a small bird that is a sit-and-wait predator) vision, the reflectance of prey items and the background, and irradiance interacted to change how the bird looked for food items. Read More...

 








Physics

Hydrothermal fabrication of well-ordered ZnO nanowire arrays on Zn foil: room temperature ultraviolet nanolasersSeptember 2011
JY Kim, H Jeong, and DJ Jang… - Journal of Nanoparticle Research
Well-ordered nanowires of the hexagonal wurtzite ZnO having an average diameter of 80 nm, a typical length of 12 μm, and a mean packing density of 7.5 nanowires μm−2 have been directly grown on Zn foil in a preferred [0001] direction by a hydrothermal process and employed for room temperature ultraviolet nanolasers. The lasing action of arrayed ZnO nanowires has been observed from 370 to 400 nm with threshold irradiance of 25 kW cm−2. Photoluminescence decays biexponentially: the fast component is attributed to free-exciton decay, and the slow one is to bound-exciton decay. The amplitude of the fast component increases whereas its lifetime decreases with the increment of threshold irradiance, suggesting that ZnO nanowire arrays undergo a change in the lasing mechanism from exciton–exciton scattering to electron–hole plasma recombination. ... Absorption spectra were measured using a StellarNet EPP2000C UV–VIS reflectance spectrometer, and Raman spectra were measured using an OLYMPUS BX41 confocal microscope Raman system equipped with a Dynamic Laser LS300 Ar laser as the excitation source. View PDF.


Design Principles of FRET-Based Dye-Sensitized Solar Cells with Buried Quantum Dot Donors-June- 2011
S Itzhakov, S Buhbut, E Tauber, T Geiger, A Zaban, and D Oron - Advanced Energy Materials
In this article, the physics of FRET is demonstrated for an architecture of dye-sensitized solar cells, in which the quantum dot “antennas” that serve as donors are incorporated into the solid titania electrode, providing isolation from electrolyte quenching, and potentially increased photostability. The energy transferred to the dye acceptor from the quantum dot donor, in addition to the direct light absorption by the dye, finally induce dye excitation and electron injection to the metal oxide semiconductor electrode. We use time-resolved photoluminescence measurements to directly show achievement of FRET efficiencies of up to 70%, corresponding to over 80% internal quantum efficiency when considering radiative energy transfer as well. The various parameters governing the FRET efficiency and the requirements for high efficiency FRET-based cells are discussed. Since both buried donors inside the electrode and donors solubilized in the electrolyte have both been shown to achieve high energy transfer efficiencies, and as the two methods take advantage of different available volumes of the electrode to introduce donors providing the excess absorption, synergy of the two methods is highly promising for achieving panchromatic absorption within a thin electrode...The absorption and emission spectra of both the QDs and the SQ02 dye molecules were recorded using a JASCO V-630 and a StellarNet UV-VIS-NIR fiber optic spectrometers and are shown in Figure 6. SQ02 solution shows an absorption max at 655 nm. View PDF.



Effect of fabrication parameters on morphological and optical properties of highly doped p-porous silicon-June 2011
M Zare, A Shokrollahi and F Seraji- Applied Surface Science, 2011
Porous silicon (PS) layers were fabricated by anodization of low resistive (highly doped) p-type silicon in HF/ethanol solution, by varying current density, etching time and HF concentration. Atomic force microscopy (AFM) and field emission scanning electron microscope (FESEM) analyses were used to investigate the physical properties and reflection spectrum was used to investigate the optical behavior of PS layers in different fabrication conditions. Vertically aligned mesoporous morphology is observed in fabricated films and with HF concentration higher than 20%. The dependence of porosity, layer thickness and rms roughness of the PS layer on current density, etching time and composition of electrolyte is also observed in obtained results. Correlation between reflectivity and fabrication parameters was also explored. Thermal oxidation was performed on some mesoporous layers that resulted in changes of surface roughness, mean height and reflectivity of the layers
... The reflection spectrum was evaluated by Stellar Net EPP2000-HR High Resolution Miniature Spectrometer... For this purpose, we take a halogen – tungsten lamp as a light source and a Stellar Net EPP2000-HR Miniature Spectrometer with 5 Å resolution.  View PDF.-

Photoluminescence waveguiding in CdSe and CdTe QDs–PMMA nanocomposite films-September 2011
I Suárez, H Gordillo, R Abargues, S Albert, and J M Pastor - Nanotechnology, 2011
In this paper, active planar waveguides based on the incorporation of CdSe and CdTe nanocrystal quantum dots in a polymer matrix are demonstrated. In the case of doping the polymer with both types of quantum dots, the nanocomposite film guides both emitted colors, green (550 nm, CdTe) and orange (600 nm, CdSe). The optical pumping laser can be coupled not only with a standard end-fire coupling system, but also directing the beam to the surface of the sample, indicating a good absorption cross-section and waveguide properties. To achieve these results, a study of the nanocomposite optical properties as a function of the nanocrystal concentration is presented and the optimum conditions are found for waveguiding. ... When PL experiments (section 3.3) have been carried out a cylindrical lens has been used to focus this line into a point to fiber optics connected to a spectrograph (StellarNet EPP2000). Propagation properties depend strongly on the filling factor of the active layer. View PDF.


Surface modification of polytetrafluoroethylene film using single liquid electrode atmospheric-pressure glow discharge-June 2011
L Zhou, GH Lü, W Chen, H Pang, GL Zhang, and SZ Yang- Chinese Physics B, 2011
Polytetrafluoroethylene films are treated by room temperature helium atmospheric pressure plasma plumes, which are generated with a home-made single liquid electrode plasma device. After plasma treatment, the water contact angle of polytetrafluoroethylene film drops from 114° to 46° and the surface free energy increases from 22.0 mJ/m2
 to 59.1 mJ/m2. The optical emission spectrum indicates that there are reactive species such as O+2, O and He in the plasma plume. After plasma treatment, a highly crosslinking structure is formed on the film surface and the oxygen element is incorporated into the film surface in the forms of —C—O—C—, —C=O, and —O—C=O groups. Over a period of 10 days, the contact angle of the treated film is recovered by only about 10°, which indicates that the plasma surface modification is stable with time ... free energy of PTFE samples and its polar and dispersive components were calculated with the measured contact angles of the two liquids using the Owens- Wendt method.[31−33] The optical emission spectrum of APGD plume was investigated by Stellarnet EPP- 2000C. View PDF.

TiO2 absorption and scattering coefficients using Monte Carlo method and macroscopic balances in a photo-CREC unit-August 2011
J Moreira, B Serrano, A Ortz, and H de Lasa - Chemical Engineering Science, 2011
The radiation field inside photocatalytic reactors can be predicted by solving the Radiative Transfer Equation (RTE). From the solution of the RTE, the local volumetric rate of energy absorption (LVREA) can also be obtained. This LVREA is an important parameter in photocatalytic reactor design, energy efficiency assessments and kinetic studies of photocatalytic reactions. However, when solving the RTE, two optical parameters are needed: (1) the absorption and scattering coefficients and (2) the phase function. In the present study, the Monte Carlo (MC) method along with an optimization technique is shown to be effective in predicting the wavelength-averaged absorption and scattering coefficients for three different TiO2 powders. To accomplish this, the LVREA and the transmitted radiation (Pt) in a Photo-CREC annular photoreactor have to be determined by using a macroscopic balance. The optimized coefficients are calculated ensuring that they comply with a number of physical constrains, falling in between bounds established via independent criteria. The optimization technique is demonstrated by finding the absorption and scattering coefficients for three different semiconductors that best fit the experimental values from the macroscopic balance minimizing the least-squared error of objective functions for the LVREA and Pt. The proposed approach is a general and promising one, not being restricted to reactors of concentric geometry, specific semiconductors and/or particular photocatalytic reactor unit scale
... tubing (refer to Figure 4). The Photo-CREC Water II photocatalytic reactor has seven 1.1-cm in diameter circular windows equally spaced made of fused silica (number 4 in Figure 3). Radiation measurements were made at each window position using a StellarNet EPP2000C-25.
View PDF.


Optically thin composite resonant absorber at the near-infrared band: a polarization independent and spectrally broadband configuration –July 2011
KB Alici, AB Turhan, CM Soukoulis, and E Oz- Optics Express, 2011
We designed, fabricated, and experimentally characterized thin absorbers utilizing both electrical and magnetic impedance matching at the near-infrared regime. The absorbers consist of four main layers: a metal back plate, dielectric spacer, and two artificial layers. One of the artificial layers provides electrical resonance and the other one provides magnetic resonance yielding a polarization independent broadband perfect absorption. The structure response remains similar for the wide angle of incidence due to the sub-wavelength unit cell size of the constituting artificial layers. The design is useful for applications such as thermal photovoltaics, sensors, and camouflage. ...The signal was measured by using a StellarNet Red Wave NIR spectrometer at the infrared regime (900 nm–1700 nm).
View PDF.

 
Fig. 5. Simulated absorption response of the SRR based metamaterial absorber for several incidence angles.


Optical properties of the polycrystalline transparent Nd: YAG ceramics prepared by two-step sintering-May 2011.

J Li, Q Chen, G Feng, W Wu, D Xiao, and J Zhu- Ceramics International, 2011
Nd-doped YAG ceramics were fabricated by the solid-state reaction and two-step vacuum sintering method. It is found that the samples exhibit pore-free and homogeneous microstructures and their transparency is up to 84.98% at the visible and near-infrared band and 87% in the mid-infrared wave range. The absorption cross section of 0.3% Nd:YAG at 808 nm is 5.47 × 10−20 cm2, while the emission cross section at 1064 nm is 4.66 × 10−19 cm2. The different transmittances of the samples depending on the sintering conditions were also discussed... The fluorescence spectra of the specimens excited by an 808 nm laser diode (LD) were measured by a spectrograph (EPP2000/EPP2000C, StellarNet, USA). All the optical spectrums were measured at room temperature. 3. Results and discussion.  View PDF.


Deposition of ZnO multilayer on LiNbO3 single crystals by DC-magnetron sputtering-July 2011
M Shirazi, MT Hosseinnejad, A Zendehnam, Z Ghorannevis, and M Ghoranneviss- Applied Surface Science, 2011
Zinc oxide (ZnO) thin films were deposited on LiNbO3 (LN) single crystals with 200 nm thicknesses by three different ways, where coating of zinc (Zn) film was followed by thermal oxidation for four, two, and one steps with 50, 100, and 200 nm thicknesses repeatedly. Sample, which was produced at 4-step of deposition and oxidation of Zn layer, showed high transmittance and low structural defect due to a lower photoluminescence intensity and Urbach energy. Average grain size in X-ray diffraction (XRD), scanning electron microscopy (SEM) micrograph, and atomic force microscopy (AFM) images for multilayer of ZnO was lower than monolayer of ZnO thin films. Applying multilayer coating technique leads to decrease of surface roughness and scattering on light on surface and fabrication of LiNbO3waveguides with lower optical loss ... Photoluminescence (PL) spectra, (Stellar Net EPP-200) were taken at room temperature under 340 nm xenon lamps as the excitation source. The ZnO film structure was studied by X-ray diffraction (XRD), (X'pert PW 3373) using Cu Kα (λ = 1.54 Å) radiation. View PDF.


Runaway electron preionized diffuse discharges in atmospheric pressure with a point-to-plane gap in repetitive pulsed mode-April 2011
T Shao, C Zhang, Z Niu, P Yan, VF Tarasenko… - Journal of Applied Physics, 2011
This paper presents the results of the experimental studies of a pulsed discharge in atmospheric pressure air in an inhomogeneous electric field for various parameters of voltage pulses. It is shown that in a wide range of experimental conditions, including those with a positive electrode of small curvature radius, a diffuse discharge is ignited in the gap. In particular, a diffuse discharge is ignited at a pulse repetition frequency of 1 kHz and a voltage pulse amplitude of 25 and 40 kV across a high-resistance load. With voltage pulses of ∼ 220 kV in amplitude and low repetition frequencies, an extended (70 cm) diffuse discharge is observed in gaps of 13–40 mm. It is confirmed that the diffuse form of discharges in an inhomogeneous electric field at increased pressures is attributed to the generation of runaway electrons and x-rays... The radiation spectrum of the discharge was recorded using a spectrometer (StellarNet, EPP2000-C25). ... Figure shows the radiation spectrum of the diffuse discharge plasma in air obtained by a StellarNet EPP2000-C25 spectrometer with a 2-mm gap. View PDF.

Pulsed cathodoluminescence of diamond, calcite, spodumene, and fluorite under the action of subnanosecond e beam- Nov 2010
E. Kh. Baksht, A. G. Burachenko and V. F. Tarasenko- Technical Physics Letters
Amplitude and temporal characteristics of pulsed cathodoluminescence (PCL) of diamond (natural and synthetic), calcite, spodumene, and fluorite have been studied at a temporal resolution of 0.3 ns. The PCL was generated by electron beam pulses with a full width at half maximum (FWHM) of 0.1, 0.25, and 0.65 ns. The PCL spectra have been measured for the emission induced by 0.1- and 0.25-ns pulses at a beam current density of 90 A/cm2 ... It was demonstrated that the PCL can be generated by supershort avalanche electron beams (SAEBs) generated in gas diodes filled with air at atmospheric pressure. Previously, we have used a commercial small size BLACK-Comet spectrograph (StellarNet Inc.) ...

Provitamin D Doped Silica and Polymeric Films: New Materials for UV BiosensorOct 2010
TN Orlova, IP Terenetskaya, AM Eremenko, N. I. Surovtseva2 Institute of Physics and Chuiko Institute of Surface Chemistry, National Academy of Sciences of Ukraine
The original technologies of growing silica films, impregnated with 7-dehydrocholesterol (provitamin D3) on quartz substrates and free transparent films on the basis of polyvinyl alcohol and polyvinyl butyral have been developed. Provitamin D photoisomerization in the films under UVB irradiation was investigated by UV absorption spectroscopy. Remarkable changes in the absorption spectrum of 7-DHC were observed in silica and polyvinyl alcohol films as compared with ethanol solution, only in polyvinyl butyral film the spectrum was very nearly, while the spectral kinetics of 7-DHC photoisomerization in all the films was different from ethanol. We suggest that several films have potential as UV dosimeters to measure accumulated ‘antirachitic’ UV dose in the same manner as erythemic UV dose is measuredby commonly used polysulphone film. Spectral irradiance of the UV lamp at the sample distance 8 cm was determined using calibrated spectrometer BLACK-Comet (StellarNet, Inc). View PDF…


Figure- Transformation of the 7-DHC absorption spectrum in ethanol (a), PVB film (b), silica film (c) and PVA film (d) upon irradiation with the EL-30 UV lamp.

Synthesis of (SrLaF) FeAs superconducting films by pulsed laser deposition~ Relationship between photo excited lights and crystalline of the films~
Satoshi Kurumi, Yoshiki Takano, and Kaoru Suzuki-Department of Electrical Engineering and Department of Physics
We have tried to prepare superconducting (SrLaF)FeAs thin films by the photo excited pulsed laser deposition (PE-PLD). Theexcitation of As Sr and La atoms are observed in the luminescence spectra of the ablation plum during the deposition. The peakintensities due to above excitations become large when the ultra violet rays are irradiated to the plums. The X-ray diffractionmeasurements show that some oriented peaks of (SrLaF)FeAs are observed in the films produced by the PLD with ultra violet rays.These results indicate that the excitation by the ultra violet rays has an effective role in the growth of the superconducting thin films.... The luminescence of the ablation plums are measured by using a StellarNet BLUE-Wave spectrometer. As the optical fiber for the spectroscopic measurement is not used at hightemperature, the luminescence spectrum of the plum excited by infrared ray cannot be measured. ...

Femtosecond OPO based on LBO pumped by a frequency-doubled Yb-fiber laser-amplifier system for CARS spectroscopy –February 2011
C Cleff, J Epping, P Gross and C. Fallnich - Applied Physics B: Lasers and Optics
We present detailed investigations of a femtosecond green-pumped optical parametric oscillator (OPO) based on lithium triborate. As pump source, a frequency-doubled Yb-fiber laser-amplifier system is used. The OPO generates signal pulses tunable over a spectral range from 780 to 940 nm and idler pulses tunable from 1630 to 1190 nm. More than 250 mW are generated in the signal beam and more than 300 mW in the idler beam. Without dispersion compensation chirped signal pulses with a pulse duration between 100 and 250 fs are measured. Using this system for coherent anti-Stokes Raman scattering spectroscopy, vibrational resonances between 1110 and 6760 cm−1 can be excited. Due to the chirped pulses, a spectral resolution of 100 cm−1 is achieved, which is 2.5 times higher compared to an excitation with time-bandwidth limited pulses. ... The emission wavelengths were measured with a grating-based spectrometer (Stellarnet BLUE-Wave,0.5-nm resolution), and for each data point of the temperature tuning curve, the signal output power was optimized over the res- onator length for each crystal temperature.

Accurate color predictability based on a spectral retardance model of a twisted-nematic liquid-crystal display –February 2011

 JL Martinez, P Garcia-Martinez, MM Sanchez-Lopez and Ignacio Moreno - Optics Communications, 2011
In this work we present the application of a simple physical model to accurately predict the broadband spectral transmittance and colorimetric properties of a twisted-nematic liquid crystal display (TNLCD). We spectroscopically calibrate the retardance parameters to evaluate the spectrum of the light transmitted by a TNLCD sandwiched between two linear polarizers. When the TNLCD is illuminated with a broadband light source, the full spectrum can be predicted as a function of the addressed gray level for any arbitrary orientation of the polarizers. Thus, the color of the transmitted light can be also be estimated with very good accuracy. As an example, a polarizers' configuration is shown that yields, without using color filters, a relatively large color gamut compared to the standard configuration. Experimental results confirming the validity of such predictions are presented, both on the measured spectral responses as well as on the trajectories at different chromatic diagrams ... Fig. 2(a) shows a picture of the setup. The light transmitted by the system is focused on the back focal plane of a converging lens, where it is captured by a fiber to be analyzed with a calibrated UV-visible spectro-radiometer (Stellar-Net, model EPP-2000).


Shape and Refractive Index Recovery from Single-View Polarisation Images- June 13, 2010
Cong Phuoc Huynh, Antonio Robles-Kelly, Edwin Hancock- School of Engineering, Australian National University-National ICT Australia- Department of Computer Science, University of York
In this paper, we propose an approach to the problem of simultaneous shape and refractive index recovery from multispectral polarisation imagery captured from a single viewpoint. The focus of this paper is on dielectric surfaces which diffusely polarise light transmitted from the dielectric body into the air. The diffuse polarisation of the reflection process is modelled using a Transmitted Radiance Sinusoid curve and the Fresnel transmission theory. We provide a method of estimating the azimuth angle of surface normals from the spectral variation of the phase of polarisation. Moreover, to render the problem of simultaneous estimation of surface orientation and index of refraction well-posed, we enforce a generative model on the material dispersion equations for the index of refraction. This generative model, together with the Fresnel transmission ratio, permit the recovery of the index of refraction and the zenith angle simultaneously. We show results on shape recovery and rendering for real world and synthetic imagery. View Pdf

In addition, each light assumes the power spectrum of either the natural sunlight or an incandescent light. These power spectra have been acquired from sample light sources using a StellarNet spectrometer.
StellarNet Releases New Solar Measurement System

Comparison of visible and infrared spectrum of light sources-March 2011
M Rakic and Goran Pichler – Institute of Physics, Croatia. Optics Communications, 2011
We compared the visible and the infrared spectrum of cesium and the sodium high pressure discharge light sources of 70 W power, run at different voltages from 180 to 240 V. Although the cesium discharge lamp exhibits remarkable white light in the visible spectrum, it suffers from the large infrared radiation intensity. The study of the causes of large infrared losses and their possible reduction was the main motivation for the present investigation. Sodium discharge plasma appears to be more efficient light source than the cesium discharge plasma due to the smaller infrared emission, although the latter has much better colour rendering index. ... 5 mm. For the infrared spectral region the StellarNet RED-Wave spectrometer (512 pixels, resolution 3.1 nm).

Photoelectrochemical Performance of Anatase TiO2 Thin Films Deposited by Self-Limiting Growth Techniques- May 27, 2010
Fengli Wang, Nicholas G. Kubala, and Colin A. Wolden Department of Chemical Engineering, Colorado School of Mines
Anatase TiO2 photoanodes were deposited by self-limiting growth techniques at low temperature. The optical bandgap and flatband voltage of the as-deposited films agree with the values obtained from single crystal anatase. The donor density could be increased by both UV illumination and cathodic polarization in acidic solutions. Improvements in photocurrent scaled closely with changes in carrier concentration, with over 20-fold enhancements observed over the as-deposited films. The threshold potential for hydrogen intercalation was −0.6 V vs Ag/AgCl. At this level the carrier concentration could be manipulated with no change in optical transmission. At lower potentials irreversible changes are observed which are attributed to the reduction of the underlying indium tin oxide contact. In contrast, no changes were observed when fluorinated tin oxide was used as the contact layer. ... All films were polycrystalline in nature, displaying the anatase signatures in both X-ray diffraction patterns and Fourier transform IR spectra. Transmission measurements on deposited films were performed using a UV/visible spectrophotometer (Stellarnet). ... View PDF...

Spectral analysis of femtosecond pulse diffraction through binary diffractive optical elements: theory and experiment
O Mendoza-Yero, G Mínguez-Vega, J Lancis, E Tajahuerce, and V Climent-OPTICS EXPRESS, Vol 16, No.4.
We report on the changes in the spectrum of a femtosecond pulse originated by diffraction of the ultrashort waveform through a circularly symmetric binary diffractive optical element. The analysis is performed in the framework of the Rayleigh-Sommerfeld formulation of the diffraction, where an analytical expression for the monochromatic amplitude distribution close to the optical axis is obtained. To corroborate our results, we experimentally measure the variations of the pulse spectrum within the collecting area of a spectrometer located at the output plane. Multiple splitting of the pulse spectrum in the vicinity of a focal position and a phase singularity are shown... The output integrated power spectrum was measured with a StellarNet EPP2000 fiber optics spectrometer (wavelength range from 135 nm to 1100 nm), whose input collecting area was limited by a pinhole…View PDF.

 
Fig. Integrated output spectrum for pinholes of a) r0
= 75ìm , b) r0 = 200ìm and c) for the incoming ultrashort pulse (without pinhole).


Electrical and gas sensing properties of polyaniline-chloroaluminium phthalocyanine composite thin films

M. E. Azim-Araghi and M. J. Jafari- Applied Physics Division, Physics Department, Tarbiat Moallem University, Tehran, Iran
Electrical and gas sensing properties polyaniline-chloroaluminium phthalocyanine (PAni-ClAlPc) composite thin films were investigated to study the gas sensing behavior of composites. Devices (chemiresistor gas sensors) were prepared by spin coating method from PAni as the base of composites and ClAlPc (with different concentrations) as the second component onto interdigitated electrodes. The sensitivity, reversibility, response and recovery time of these thin films on exposure to different concentrations (0–2000 ppm) of CO2 gas and the suitability of different composites as materials to be used in practical gas sensors at different temperatures were investigated. The sensitivity factor of composites was obtained in a range between 0.05–7.20. PAni + 10% ClAlPc was the perfect candidate composite to fabricate gas sensor at 300 K and PAni + 15% ClAlPc at 350 K. Thus, (PAni-ClAlPc) composites have better response than pure PAni. After that, devices were exposed to humidity, an unexpected behavior was absorbed. Conductivity of thin films were increased on exposure lower RH% and decreased on higher RH%. Finally, 1000 ppm CO2 was mixed to humidity and introduced to chamber, obtained results showed the CO2 mixtures decreased the sensitivity of thin films in compare with pure CO2. ... This was spun at a speed of 500 rpm for 5 s and at a speed of 2.500 rpm for 15 s after coating, devices were dried at room temperature for 24 h. The thicknesses of thin films were measured in the range 400–500 nm by optical spectrometer (StellarNet. TF-C-UVIS). ...


Comparison of diode-side-pumped Nd:YAG and Nd:YAP laser-
Jan Sulca, Helena Jelínková, Jan K. Jabczy nski Waldemar Z_ endzianb, Jacek Kwiatkowskb, Karel Nejezchleb, Václav skoda- Czech Technical University, Faculty of Nuclear Sciences and Physical Engineering- Military University of Technology, Institute of Optoelectronics
Nd:YAG and Nd:YAP slab crystal in the form of triangle with the Brewster-angle-cut polished input faces was used as an active medium for diode-side-pumped laser. A horizontal projection of the active medium form is a triangle with 19.22mm long base, 5mm height, and thickness of 4 mm. This active crystal shape is one from the simplest form which makes possible to realise a slab side-pumped con guration with a total internal re ection. Optical pumping was accomplished by a quasi-cw diode ARR18P400 with peak power 400W closely attached to the active crystal without any coupling optics. Both material were operated for most known Nd3+ ion transition 4F3=2 ! 4I11=2 (1 ¹m) as well as for transition 4F3=2 ! 4I13=2 which leads to the emission at 1.3 ¹m. The systems were tested in free running and Q switch regime. This system is enough compact to be useful tools for direct medical application. View PDF...


Spectrum of free-running Nd:YAG laser emission corresponding to operation at Nd3+ transition 4F3=2 ! 4I13=2 and Spectrum of free-running Nd:YAP laser emission corresponding to operation at Nd3+ transition 4F3=2 ! 4I13=2.

Spectroscopic Diagnostics of an Atmospheric Microwave Plasma for Monitoring Metals Pollution
P. P. Woskov, K. Hadidi, M. C. Borrás, P. Thomas, K. Green, G. J. Flores Plasma Science and Fusion Center, Massachusetts Institute of Technology
A 1.5 kW, 2.45 GHz microwave sustained plasma in a flowing sample of stack exhaust gas has been shown in recent DOE/EPA testing to be an accurate monitor of trace hazardous metals (in the part per billion range) such as lead, chromium, and beryllium. Optical-UV spectroscopic studies are being carried out to better understand this particular atmospheric pressure plasma torch.


OH Emission Spectra of Hybrid Rocket Motors Using PMMA and HTPB
Edmond W. Wilson, Jr., James E. Mackey, Brett D. Keller, Elaine J. Goertzen, Sheryl A. Clements, and Charles D. Rivenbark- Harding University and Calvin Cox- University of Arkansas
The development of sensors for hybrid rocket motors has lead to the use of near-infrared diode lasers for characterizing hybrid rocket plumes. Emission Spectra obtained can be used to calculate species concentrations and temperatures, both spatially and temporally, in rocket exhaust plumes. In this paper we report our findings from a study of the emission spectra of hybrid rocket exhaust plumes in the ultraviolet, UV, visible, VIS, and near-infrared, NIR, regions of the electromagnetic spectrum. View PDF

  

StellarNet BLACK-Comet Spectrometer series are the new analogue of old EPP2000C models

Ultraviolet-Visible Spectrometry Characterization of Combustion in Hybrid Rocket Motors
Edmond W. Wilson, Jr., Brett D. Keller, Kellen M. Harkness,Christopher S. Smeal, Megan S. Easterly and James E. Mackey, Department of Physical Science, Harding University
Small, portable ultraviolet and visible spectrometers can be used to characterize the combustion and regression rates of hybrid rocket and other combustion emission plumes. In this study, two spectrometers, operating in the ultraviolet and visible ranges, were used to measure the hydroxyl radical emission spectrum and the broadband visible emission spectrum of hybrid rocket motors under a variety of oxidizer to fuel ratios. Time and spatial profiles were measured along with regression rates. Correlations were drawn between broadband emission spectra and regression rates.View PDF

 

Organic semiconductor devices for micro-optical applications
Martin Punke, Steffen Mozer, Marc Stroisch, Martina Gerken, Georg Bastian, Uli Lemmer, Dominik G. Rabus, and Patric Henzi
Universität Karlsruhe (TH), Light Technology Institute (LTI), Institute for Microstructure Technology, Baskin School of Engineering, University of California, Santa Cruz

The use of organic optoelectronic devices such as organic light-emitting diodes and organic photodiodes in micro-optical systems is discussed. Potential applications like optical interconnects and optical sensor systems are examined. Device characteristics including emission spectra, I-V-curves and the dynamic behaviour are analyzed. In the combination with a polymeric optical fibre (POF) a transmission line comprising a organic light emitting diode and organic photodiodes is demonstrated. An important step towards integration is realized by coupling the amplified spontaneous emission of an organic semiconductor material into a single mode polymethylmethacrylate (PMMA) waveguide. View PDF
                  


Colour-tunable spiral photonic actuators
Kwang-Un Jeong, Ji-Hyun Jang, Cheong Yang Koh, Matthew J. Graham, Kwang-Yong Jin, Soo-Jin Park, Changwoon Nah, Myong-Hoon Lee, Stephen Z. D. Cheng and Edwin L. Thomas Department of Polymer-Nano Science and Technology, and Polymer Materials Fusion Research Centre, Chonbuk National University, Korea
Combining the multi-faceted environmental responsiveness of polymers with photonically active structures, we developed spiral photonic actuators which can reversibly change both shape and colour in response to the chemical environment. Read more...

Experimental reflectivity spectra of the fabricated photonic crystals: (a) silica, (b) PDMS/silica, (c) PDMS/silica in hexane, and (d) PDMS/silica in acetic acid.

Wavelength-scalable hollow optical fibres with large photonic bandgaps for CO2 laser transmission
Burak Temelkuran, Shandon D. Hart, Gilles Benoit, John D. Joannopoulos & Yoel Fink- Research Laboratory of Electronics and Department of Materials Science and Engineering, Massachusetts Institute of Technology
Here we report on the design and drawing of a hollow optical fibre lined with an interior omnidirectional dielectric mirror. Confinement of light in the hollow core is provided by the large photonic bandgaps established by the multiple alter-nating submicrometre-thick layers of a high-refractive-index glass and a low-refractive-index polymer. The fundamental and high-order transmission windows are determined by the layer dimensions and can be scaled from 0.75 to 10.6mm in wavelength.The transmission losses are found to be less than 1.0 dB m 21, orders of magnitude lower than those of the intrinsic fibre material, thus demonstrating that low attenuation can be achieved through structural design rather than high-transparency material selection.


Physical properties of CdS/ITO thin films growth by CBD technique with substrate oscillating agitation
Y. A. Salazar; R. Patiño; J. L. Peña; W. Cauich; A.I. Oliva Centro de Investigación y de Estudios Avanzados del IPN Unidad Mérida, Departamento de Física Aplicada
Cadmium sulphide (CdS) thin films deposited on indium tin oxide (ITO) substrates were prepared by chemical bath deposition technique by using different conditions to agitate the bath and the substrate. The deposited films were characterized on their morphology, on the band gap energy, and on thickness. The implemented novel technique for substrate oscillation has shown to improve the films quality, by the chemical bath without colloidal precipitates and by the clean film surfaces obtained. CdS films with variable deposition time can be achieved depending on the agitating technique. In addition, by oscillating only the substrate during deposition is possible to obtain clean films and avoid the formation of colloidal precipitates on the chemical bath, normally presented when it is magnetically or ultrasonically agitated. Read more...

High Power UV and VUV Pulsed Excilamps
V. TARASENKO, M. EROFEEV, M. LOMAEV, D. RYBKA Institute of High Current Electronics Academichesky
Emission characteristics of a nanosecond discharge in inert gases and its halo-genides without preionization of the gap from an auxiliary source have been investigated. A volume discharge, initiated by an avalanche electron beam (VDIAEB) was realized at pressures up to 12 atm. In xenon at pressure of 1.2 atm, the energy of spontaneous radiation in the full solid angle was 45 mJ/cm 3 , and the FWHM of a radiation pulse was 110ns. The spontaneous radiation power rise in xenon was observed at pressures up to 12 atm. Read more...

Chemistry

Luminescence Properties and Quenching Mechanisms of Ln (Tf2N) 3 Complexes in the Ionic Liquid bmpyr Tf2N-June 2011
A Brandner, T Kitahara, N Beare, C Lin, MT Berry, and P. Stanley May - Inorganic Chemistry, ACS publications.
The emission properties, including luminescence lifetimes, of the lanthanide complexes Ln(Tf2N)3 (Tf2N = bis(trifluoromethanesulfonyl)amide); Ln3+ = Eu3+, Tm3+, Dy3+, Sm3+, Pr3+, Nd3+, Er3+) in the ionic liquid bmpyr Tf2N (bmpyr = 1-n-butyl-1-methylpyrrolidinium) are presented. The luminescence quantum efficiencies, η, and radiative lifetimes, τR, are determined for Eu3+(5D0), Tm3+(1D2), Dy3+(4F9/2), Sm3+(4G5/2), and Pr3+(3P0) emission. The luminescence lifetimes in these systems are remarkably long compared to values typically reported for Ln3+ complexes in solution, reflecting weak vibrational quenching. The 1.5 μm emission corresponding to the Er3+ (4I13/24I15/2) transition, for example, exhibits a lifetime of 77 μs. The multiphonon relaxation rate constants are determined for 10 different Ln3+emitting states, and the trend in multiphonon relaxation is analyzed in terms of the energy gap law. The energy gap law does describe the general trend in multiphonon relaxation, but deviations from the trend are much larger than those normally observed for crystal systems. The parameters determined from the energy gap law analysis are consistent with those reported for crystalline hosts. Because Ln3+ emission is known to be particularly sensitive to quenching by water in bmpyr Tf2N, the binding properties of water to Eu3+ in solutions of Eu(Tf2N)3 in bmpyr Tf2N have been quantified. It is observed that water introduced into these systems binds quantitatively to Ln3+. It is demonstrated that Eu(Tf2N)3 can be used as a reasonable internal standard, both for monitoring the dryness of the solutions and for estimating the quantum efficiencies and radiative lifetimes for visible-emitting [Ln(Tf2N)x]3–xcomplexes in bmpyr Tf2N... resolved photon counting. The detection system was calibrated for relative wavelength response using a standard Tungsten lamp with extended calibration out to 1700 nm. (Stellar Net, SL1-CAL). Luminescence lifetimes visible. View PDF.

Battery-operated, argon–hydrogen microplasma on hybrid, postage stamp-sized plastic–quartz chips for elemental analysis of liquid microsamples using a portable …-September 2011
S Weagant, V Chen, and V Karanassios - Analytical and Bioanalytical Chemistry
A battery-operated, atmospheric pressure, self-igniting, planar geometry Ar–H2 microplasma for elemental analysis of liquid microsamples is described. The inexpensive microplasma device (MPD) fabricated for this work was a hybrid plastic–quartz structure that was formed on chips with an area (roughly) equal to that of a small-sized postage stamp (MPD footprint, 12.5-mm width by 38-mm length). Plastic substrates were chosen due to their low cost, for rapid prototyping purposes, and for a speedy microplasma device evaluation. To enhance portability, the microplasma was operated from an 18-V rechargeable battery. To facilitate portability even further, it was demonstrated that the battery can be recharged by a portable solar panel. The battery-supplied dc voltage was converted to a high-voltage ac. The ∼750-μm (diameter) and 12-mm (long) Ar–H2 (3% H2) microplasma was formed by applying the high-voltage ac between two needle electrodes. Spectral interference from the electrode materials or from the plastic substrate was not observed. Operating conditions were found to be key to igniting and sustaining a microplasma that was simply “warm” to the touch (thus alleviating the need for cooling or other thermal management) and that had a stable background emission. A small-sized (900 μL internal volume) electrothermal vaporization system (40-W max power) was used for microsample introduction. Microplasma background emission in the spectral region between 200 and 850 nm obtained using a portable fiber-optic spectrometer is reported and the effect of the operating conditions is described. Analyte emission from microliter volumes of dilute single-element standard solutions of Cd, Cu, K, Li, Mg, Mn, Na, Pb, and Zn is documented. The majority of spectral lines observed for the elements tested were from neutral atoms. The relative lack of emission from ion lines simplified the spectra, thus facilitating the use of a portable spectrometer. Despite the relative spectral simplicity, some spectral interference effects were noted when running a multi-element solution. An example of how interference in the spectral domain can be resolved in the time domain using selective thermal vaporization is provided. Analytical utility and performance characteristics are reported; for example, K concentrations in diluted (∼30 times) bottled water were determined to be 4.1 ± 1.0 μg/mL (4 μg/mL was the stated concentration), precision was about 25%, and the estimated detection limits were in the picogram range (or in nanograms per milliliter in relative units). ... Analyte emission was monitored using a portable fiber- optic spectrometer with an integrating, 2,048-pixel charge- coupled device (CCD) detector (Fig. 2). The portable spectrometer was an enhanced parallel port system (EPP 2000C) commercially available from StellarNet Inc. View PDF.
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Figure Battery-operated, atmospheric-pressure microplasma on a chip


Atmospheric Microplasma Jet: Spectroscopic Database Development and Analytical Results-September 2011
RVL Wal, JH Fujiyama-Novak, CK Gaddam, D Das, A Hariharan, B Ward - Applied Spectroscopy V65, Issue 9, 2011
This paper presents a developed dielectric-barrier-discharge-based “sniffer“ that offers unique characteristics not available from other techniques. It is a portable, highly specific, and sensitive detector that operates at atmospheric pressure. It provides both molecular and elemental information on organic and inorganic gases and particulate aerosols. Measurements were made to electrically characterize the plasma and calculate the energy coupled into the plasma. We created a signature database for diverse chemicals based on the atomic and diatomic emission spectrum that serves to classify the compound and ideally recognize it by composition with the optical emission intensity corresponding to concentration. For some operational regimes and species, emission from OH (A2Σ+-X2Π), CH (A2Δ-X2Π), and often C2 (d3Πg-a3Πu; Swan band system) diatomic radicals is produced. Limits of detection extend to parts per billion (ppb) levels for some species such as decane, 2-decanol, and nitrobenzene. Results are presented for differentiation of classes of organic compounds such as alkanes, aromatics, oxygenates, chlorinated, and nitrogen-containing organic compounds. ... The light emitted from the plasma jet was collected by an optical fiber bundle (F1000-UV-VIS-SR) connected to a collimating lens (74-UV UV/VIS) and guided to the StellarNet Black Comet C-25 Spectrometer (grating: holographic 590 grooves/mm; slit width: 25 lm. View PDF.


Nano-Biomimetic Materials for the Detection of Chemical Agents in Gases, Aerosols, and Solutions- Oct 2010
AL Jenkins, LC Buettner and  Michael W. Ellzy -US Army Edgewood Chemical and Biological Center
Recent advances in molecularly imprinted polymers (MIPs) have created a new class of synthetic materials that can mimic the function and selectivity of the bioreceptors with significantly improved stability and real-time sensing capability.1, 2 As a result; molecularly imprinted polymers can provide high sensitivity and selectivity for molecular recognition while maintaining excellent thermal and mechanical stability. MIPs have been demonstrated to be extremely selective for the agents and related pesticides in water and organic matrices, with detection limits in the low parts per trillion3, 4 however the application of these materials for air/vapor detection has never been demonstrated. This work combines the sensitivity and selectivity of previously demonstrated MIP sensors with the capture efficiency of denuder technology to create a sensor platform capable of detecting phosphorus based chemical agents, hydrolysis products and pesticides in all weaponized forms. Spectra were also collected with a StellarNet Blue Wave miniature fiber optic UV-vis Spectrometer (StellarNet Inc, Tampa, FL). The MIP-Denuder system combined the MIP setup (both the large benchtop version and the miniature StellarNet setup) with the denuder. View PDF…


Luminol-Based Enhanced Chemiluminescence Assay for Quantification of Peroxidase and Hydrogen Peroxide in Aqueous Solutions: Effect of Reagent pH and Ionic Strength- Oct 2010
Alok Bhandari, Wongee Kim, and Keith Hohn- Iowa State University, Kansas State University
The effect of reagent pH and ionic strength was evaluated on the horseradish peroxidase (HRP)-luminol-p-iodophenol enhanced
chemiluminescence assay. This assay was optimized for HRP and H2O2 quantification during enzyme-mediated remediation of groundwater
or wastewater contaminated with phenolic chemicals. The maximum chemiluminescence intensity (ICLmax) and total area under the chemiluminescence intensity profiles were measured as a function of p-iodophenol concentration, reagent solution pH, and reagent ionic strength. ICLmax values were optimum at pH 8.5 and increased linearly with reagent ionic strength. Optimum chemiluminescence enhancement was produced at a p-iodophenol concentration of 0.3 mM under the reaction conditions. ICLmax values were linearly correlated with HRP and H2O2 concentrations within the ranges of 0.1–1 activity units/mL and 0.1–1 mM, respectively. Results indicate that the HRP-luminol-p-iodohenol enhanced chemiluminescence assay has a potential to be used for quantification of HRP activity and H2O2 concentration in aqueous solutions encountered in groundwater remediation or wastewater treatment scenarios.
... Experiments were first conducted for baseline reaction conditions defined by pH 8.5, 0.5-mM luminol, 0.1-mM -iodophenol, 2 AU/mL HRP, 5-mM , and 50-mM ionic strength.  Chemiluminescence was measured using an EPP Miniature Fiber Optic Spectrometer from StellarNet...Read More

A microelectrochemical scanning flow cell with downstream analytics-January 2011
SO Klemm, JC Schauer, B Schuhmacher and Achim Walter Hassel - Electrochimica Acta.
The combination of a capillary based microelectrochemical flow cell system and downstream UV–vis analytics allows obtaining synchronized electrochemical and spectroscopic data in a fully automated mode. This method combination can be generally applied to microelectrochemical studies in which an electrochemical species is released or consumed during the electrochemical reaction. For the example of pure zinc surfaces, the characterization of the integrated spectroscopic system is presented with a Zn2+ detection limit below 0.1 μmol l−1 using Zincon as complexing agent. A parameter screening of the effect of pH in the range of 6.6–9.0 in borate buffer reveals a linear increase in zinc dissolution with proton concentration but a distinct step in the open circuit potential from the active state (around −700 mV SHE, pH 6.6–7.1) to the passive state (around −300 mV SHE, pH 7.4–9.0) indicating the formation of a closed passive layer. This mechanism is strongly influenced by sulfate anions which increase the dissolution rate of the passive film and promote the active state as monitored by the dissolution profile and OCP (open circuit potential) values. Within the scope of this parameter variation, the congruency between OCP transients, potentiodynamic sweeps and time resolved dissolution profiles is discussed... 2.4. UV–vis spectroscopy. A StellarNet EPP 2000 (StellarNet Inc., Tampa, USA) spectrometer using a 2048 pixel OMA (optical multichannel array) with 300 μm fiber optics was equipped with a SL-1 Tungsten Halogen lamp with a wavelength range from 350 to 2300 nm.


Kinetic and thermodynamic study of the reaction catalyzed by glucose-6-phosphate dehydrogenase with nicotinamide adenine dinucleotide-January 2011
JS Martín del Campo and Rodrigo Patiño - Thermochimica Acta.
The enzyme glucose-6-phosphate dehydrogenase (G6PD, EC 1.1.1.49) from Leuconostoc mesenteroides has a dual coenzyme specificity with oxidized nicotinamide adenine dinucleotide (NADox) and oxidized nicotinamide adenine dinucleotide phosphate as electron acceptors. The G6PD coenzyme selection is determined by the metabolic cellular prevailing conditions. In this study a kinetic and thermodynamic analysis is presented for the reaction catalyzed by G6PD from L. mesenteroides with NADox as coenzyme in phosphate buffer. For this work, an in situ spectrophotometric technique was employed based on the detection of one product of the reaction. Substrate and coenzyme concentrations as well as temperature and pH effects were evaluated. The apparent equilibrium constant, the Michaelis constant, and the turnover number were determined as a function of each experimental condition. The standard transformed Gibbs energy of reaction was determined from equilibrium constants at different initial conditions. For the product 6-phospho-d-glucono-1,5-lactone, a value of the standard Gibbs energy of formation is proposed, ΔfG = −1784 ± 5 kJ mol−1.
The evolution of the reaction was followed in real time, monitoring the NAD red product formation with a maximum of absorption at 340 nm of wavelength, through an optical probe connected to a spectrophotometer (BLUE-Wave, StellarNet) with 0.20 or 2.0 cm of cell length.

Electrochemical texturing of Al-doped ZnO thin films for photovoltaic applications-February 2011

SO Klemm, SE Pust, AW Hassel, J Hüpkes and Karl J. J. Mayrhofer - Journal of Solid State Electrochemistry
The processes during chemical and electrochemical etching of Al-doped ZnO are investigated utilizing a scanning flow cell setup with online detection of dissolved Zn ions. The rate of chemical dissolution was found to be a linear function of buffer and proton concentration in near neutral pH solutions according to a transport limited reaction. In contrast, electrochemical etching is limited by the kinetics of the reaction and increases linearly with the imposed current density. Due to this fundamental difference, the dissolution of Zn can be either uniform over the whole surface or highly localized at active sites like grain boundaries. A combined approach of chemical etching and the well-controllable galvanostatic dissolution thus allows a fine adjustment of the ZnO:Al surface texture for applications in silicon thin film photovoltaic cells in order to improve their overall energy conversion efficiency. ... A tungsten halogen lamp and the detector (EPP 2000, StellarNet, USA) were connected using 300 μm optical fibers. The absorption at 580 nm was measured once every 1.2 s and transformed into a concentration using the proportionality factor as...



Visible Attenuated Total Reflection (ATR): A New Technique for High-Strength Pigment AnalysesMarch 2011
KA Lee, Rich Danny C. - Applied Spectroscopy, 2011
A visible-attenuated total reflection (visible-ATR) device was designed to provide a method for directly determining the relative tint strength in high-strength inks. This device showed good reproducibility and the spectra could be correlated to known values of relative tint strength in viscous, highly pigmented inks well within the industry-acceptable error (±5% tint strength). The results of the visible-ATR measurements were compared to those from mid-infrared (mid-IR) and near-infrared (NIR) spectroscopy and the capabilities of those techniques for determining ink strength. Mid-IR analysis was able to directly quantify relative tint strengths, as well as correlating to known values, and to qualify ink products by spectral matching. NIR analysis was able to quantify the tint strength based on the vehicle concentrations in the NIR region. The visible region of the NIR spectrometer was not able to be used for quantification. The vis-ATR and mid-IR spectra showed changes over the time scale of minutes, indicating self-stratification of the pigment and varnish. ... optics. The reflected light was collected and channeled to a detector system, the BLUE-Wave (StellarNet, Inc., Tampa, FL) diode array. ... naphtha. Spectra Wiz software (StellarNet, Inc., Tampa, FL) version 4.2 with SWUpdate 4.2b was used.

A survey of phosphors novel for thermography- Oct 2010
J Brubach, T Kissel, M Frotscher, M Euler, B Albert- Journal of Luminescence, 2010
With regard to phosphor thermometry, seven luminescent ceramic materials were synthesised and characterised, namely CaMoO4:Eu3+, CaTiO3:Pr3+, LaPO4:Eu3+, LaVO4:Eu3+, LiAl5O8:Fe3+, TiMg2O4:Mn4+ and ZnGa2O4:Mn2+. In this context, emission spectra and temperature lifetime characteristics are presented. Thus, a survey of phosphors novel for thermography is given in order to encourage further studies and more detailed characterisations of the respective materials. The luminescence spectra were monitored by a fiber-coupled StellarNet BLACK-Comet spectrometer within a spectral range between 200 nm and 850nm (grating: 600 lines / mm, slit width: 50 m, max. resolution ...

Experimentally and theoretically observed native pH shifts in a nanochannel array January 2009
Danny Bottenus, Youn-Jin Oh, Sang M. Han, and Cornelius F. Ivory,-Department of Chemical Engineering, Washington State University and Department of Chemical and Nuclear Engineering, Center for High Technology Materials, University of New Mexico.
Lab-on-a-chip (LOC) technology provides a powerful platform for simultaneous separation, purification, and identification of low concentration multicomponent mixtures. As the characteristic dimension of LOC devices decreases down to the nanoscale, the possibility of containing an entire lab on a single chip is becoming a reality. This research examines one of the unique physical characteristics of nanochannels, in which native pH shifts occur. As a result of the electrical double layer taking up a significant portion of a 100 nm wide nanochannel, electroneutrality no longer exists in the channel causing a radial pH gradient. This work describes experimentally observed pH shifts as a function of ionic strength using the fluorescent pH indicator 5-(and-6)-carboxy SNARF®-1 and compares it to a model developed using Comsol Multiphysics. At low ionic strengths (~ 3 mM) the mean pH shift is approximately 1 pH unit whereas at high ionic strengths (~ 150 mM) the mean pH shift is reduced to 0.1 pH units. An independent analysis using fluorescein pH indicator is also presented supporting these findings.Two independent non-linear simulations coupling the Nernst-Planck equation describing transport in ionic solutions subjected to an electric field and Poisson's equation to describe the electric field as it relates to the charge distribution are solved using a finite element solver. In addition, the effects of chemical activities are considered in the simulations. The first numerical simulation is based on a surface ζ-potential which significantly underestimates the experimental results for most ionic strengths. A modified model assuming that SNARF and fluorescein molecules are able to diffuse into the hydrolyzed SiO2 phase, and in the case of the SNARF molecule, able to bind to neutral regions of the SiO2 phase agrees quantitatively with experimental results. The filtered emission spectrum was then detected with an EPP2000-CXRs UV-VIS spectrophotometer (StellarNet Inc, Tampa Bay, FL, USA). Spectra Wiz software (StellarNet Inc, Tampa Bay, FL, USA) measured the ratio of emission intensity at 580 nm and 640 nm, respectively. View PDF…



Engineering Photocatalytic Cements: Understanding TiO2 Surface Chemistry to Control and Modulate Photocatalytic Performances- June 7, 2010
Andrea Folli, Isabelle Pochard, André Nonat, Ulla H. Jakobsen, Ashley M. Shepherd, Donald E. Macphee
The present work addresses the aggregation/dispersion properties of two commercial titanias for application as photocatalysts in concrete technology. A microsized m-TiO2 (average particle size 153.7 ± 48.1 nm) and a nanosized n-TiO2 (average particle size 18.4 ± 5.0 nm) have been tested in different ionic media (Na+, K+, Ca2+, Cl, SO42−, synthetic cement pore solution) at different pHs and in real cement paste specimens. Results highlighted that ion–ion correlations play a fundamental role in TiO2 particles aggregation in the cement environment. A particle aggregation model derived from TiO2 surface chemistry is proposed here and used to justify such aggregation phenomena in real cement paste. Scanning electron microscopy–energy-dispersive X-ray spectroscopic investigations on hardened cement specimens completely confirmed the qualitative model based on titania surface chemistry. Experimental results also show how size and nature of TiO2 aggregates dramatically influence the overall photocatalytic activity of cementitious materials containing TiO2.... Light absorption measurements were undertaken to derive the band- gap between valence band and conductance band and have been carried out on TiO2 powder using UV diffuse reflectance spectroscopy (StellarNet BLUE-Wave Spectrometer, Tampa, FL). ... View PDF...


A study on methane coupling to acetylene under the microwave plasma
SHEN ChangSheng, SUN YongZhi, SUN DeKun & YANG HongSheng-State Key Laboratory of Millimeter Waves; School of Electronic Science and Engineering, Southeast University, Nanjing-School of Chemistry and Chemical Engineering, Nanjing University
By optimizing the microwave chemistry reactor made of the rectangular waveguide resonator, the methane conversion (the
maximum 93.7%) , the C2 hydrocarbon yield (the maximum 91.0%) and the acetylene yield (the maximum 88.6%) were all
greatly increased under the microwave plasma. Furthermore, for the optimal reactor, the change of the methane conversion and
the C2 hydrocarbon yield is little within the range of the pressures in the experiments. The C2 hydrocarbon is mainly made up
of acetylene, and the selectivity for acetylene is above 90%. Energy yield and space time yield of acetylene are also high. Optical
emission spectroscopy (OES) was adopted for the diagnosis of methane coupling to acetylene under microwave plasma.
The excited species (CH, C2, H2, Hα) were detected in the spectra range of 300–750 nm. Based on the products and the excited
species, the reaction mechanism of methane coupling under microwave plasma was investigated, using the thermodynamics
and kinetics of the chemical reaction.
View PDF
 
Optical emission spectrum of methane microwave plasma at 2020 Pa; (b) optical emission spectrum of methane microwave plasma at 10100 Pa.

Living anionic polymerization of methyl methacrylate controlled by metal-free phosphazene catalyst as observed by small-angle neutron scattering, gel permeation chromatography and UV-visible spectroscopy
Nobuyoshi Miyamoto,Yoshihisa Inoue, Satoshi Koizumia and Takeji Hashimotoa- Advanced Science Research Center, Japan Atomic Energy Agency
Phosphazene (PZN) catalyst, PZN catalyst coexisting with a co-catalyst 1-hydroxycyclohexyl phenyl ketone and polymethylmethacrylate (PMMA) have been observed for the first time by small-angle neutron scattering (SANS) and UV-visible spectroscopy to elucidate the aggregation behavior of the PZN molecules themselves and the state of living chain ends in a living polymer solution. Read more...
          

Nano@micro: General Method for Entrapment of Nanocrystals in Sol−Gel-Derived Composite Hydrophobic Silica Spheres
Taleb Mokari, Hanan Sertchook,Assaf Aharoni,Yuval Ebenstein,David Avnir,and Uri Banin- Institute of Chemistry, The Farkas Center for Light Induced Processes, and The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Israel
A general method for entrapment of hydrophobically coated nanocrystals in micrometer and submicrometer composite silica spheres, nano@micro, was developed. The method employs two starting solutionshydrophobic solvent containing the sol−gel precursor, a polymer, and the nanocrystals, and an emulsifying hydrophilic phase which catalyzes the sol−gel process. The use of a hydrophobic polymer, polystyrene, serves to encapsulate the nanocrystals inside the spheres while maintaining many of their original properties. The obtained nano@micro spheres were characterized structurally by transmission electron microscopy and scanning electron microscopy, chemically by energy dispersive X-ray spectroscopy, and optically by ensemble and single-particle fluorescence spectroscopy. It is possible to control the size of the microspheres from the 100 nm scale to the micrometer scale, with good monodispersivity and with good separation between the microspheres. The method is demonstrated for encapsulating a wide variety of nanocrystals, primarily semiconductors covering different spectral bands, and of different shapes including spheres and rods. The semiconductor nanocrystals impart widely tunable emission to the microspheres. A similar encapsulation technique was also applied to thiol-coated Au particles. The technique is generally applicable to other hydrophobic nanocrystal systems of magnetic, oxide, and other materials. Read more...
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Fluorescence spectra were recorded using a spectrometer/CCD setup (StellarNet BLACK-Comet model). Go to StellarNet Fluorimetry page.

 

Multiple-Color Electrochromism from Layer-by-Layer-Assembled Polyaniline/Prussian Blue Nanocomposite Thin Films
Dean M. DeLongchamp and Paula T. Hammond- Department of Chemical Engineering, Massachusetts Institute of Technology
The creation of new materials systems for lightweight and flexible displays is an extremely active research field. Electrochromic displays possess a keen advantage over other technologies because it is possible for a single electrochromic pixel to produce multiple colors in addition to white, depending on applied potential. This possibility has proven quite challenging to achieve in practice. Here we present the successful fabrication of a multiply colored electrochromic electrode using layer-by-layer (LBL) assembly. The electrode films are created by exploiting intrinsic electrostatic attraction between the polycation poly(aniline) (PANI) and a negatively ionized Prussian Blue (PB) nanoparticle dispersion. The resultant organic/inorganic nanocomposites exhibit excellent smoothness and a classical linear increase in film thickness with assembly exposure steps. Electrochemical and spectrophotometric characterization confirms the distinct and noninteracting contributions from PANI and PB and reveals that both are fully electrochemically accessible even in thick, high contrast films. Switching speed is accelerated due to the incorporation of electronically conducting PANI. The PANI/PB nanocomposite undergoes an uncolored to green to blue transition over the potential range from −0.2 to 0.6 V vs K-SCE. These results validate an LBL-assembly-based intermixing strategy for the design of multiple-hue electrochromic electrode films. Future horizons include extension to other materials, with the eventual goal of creating a single electrode film or electrochemical cell capable of displaying any visible color on demand
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Spectral characterization was performed with a StellarNet BLACK-Comet concave grating UV−vis−NIR spectrophotometer with combined incandescent and deuterium lamp sources....Read more...

Chemical Synthesis of a Polyaniline/Gold Composite Using Tetrachloroaurate
John M. Kinyanjui and David W. Hatchett- Department of Chemistry, University of Nevada and J. Anthony Smith and Mira Josowicz- Department of Chemistry and Biochemistry, Georgia Institute of Technology
The chemical synthesis of polyaniline (PANI) is explored using tetrachloroaurate, AuCl4-. These studies provide a simple method for the oxidation of aniline by AuCl4- and simultaneous formation of bulk quantities of a PANI/Au composite. In situ UV/vis spectroscopy indicates that the rate of formation of gold colloids and intermediate (short-chain) PANI species is rapid in comparison to that of the long-chain PANI. Longer PANI chains are produced at a slower rate, at the expense of short-chain intermediate species. The gold particles act as nucleation sites for the oxidative formation of PANI, encapsulating the metal in the form of a polymer/metal composite. Results from the elemental analysis and the FTIR spectra of the composite material are consistent with PANI produced using only ammonium persulfate as the oxidant. In addition, XPS, optical microscopy, and TEM diffraction show that the gold particles are polycrystalline with relatively constant diameter (0.8−1 μm). Finally, the PANI/Au/HBF4 conductance does not change significantly with the introduction of Au particles, relative to that of PANI/HBF4 without Au particles. These studies provide a new method for growth of PANI/metal composites where the presence of the metal in the polymer does not adversely affect the electronic structure.
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All spectra were obtained using a StellarNet BLUE-Wave fiber optic spectrophotometer equipped with a D2 lamp (SL3 Lamp) and tungsten filament (SL1 Lamp) source that were coupled into a single fiber. ...

Titania−Acrylic Coil Reactor for Photocatalytic Water Purification and Sterilization
Luke H. Loetscher, Jonathan M. Carey, Stephanie L. Skiles, Vanessa M. Carey and Joel E. Boyd- Department of Chemistry, Wayland Baptist University
A titania−acrylic composite reactor was constructed with a coil geometry. The presence of multiple titania layers within the reactor increases the titania surface area while making maximum use of the illumination provided. Both compact fluorescent blacklight (CFL) and ultraviolet light emitting diodes (LEDs) were used as illumination sources. An external pump was used to recirculate 650−800 mL of water containing organic, metallic, or bacterial contamination through the coil reactor. Complete purification of the water was achieved within 300 min with 10 ppm methylene blue, 10 ppm methyl orange, 20 ppm Pb2+, and 2200 colony forming units per milliliter (CFU/mL) of E. coli respectively using the CFL source. The effectiveness, low cost, durability, ruggedness, and energy efficiency of this reactor are advantageous for both portable and fixed-base applications. Read more...
                         

Spectra from both light sources and UV−vis spectra for MB and MO were collected on a StellarNet BLACK-Comet ... Irradiance spectra were collected with a fiber-mounted cosine receptor (StellarNet model CR2). ...

Electron Exchange between α-Keggin Tungstoaluminates and a Well-Defined Cluster-Anion Probe for Studies in Electron Transfer
Yurii V. Geletii, Craig L. Hill, Alan J. Bailey, Kenneth I. Hardcastle, Rajai H. Atalla, and Ira A. Weinstock
Fully oxidized α-AlIIIW12O405- (1ox), and one-electron-reduced α-AlIIIW12O406- (1red), are well-behaved (stable and free of ion pairing) over a wide range of pH and ionic-strength values at room temperature in water. Having established this, 27Al NMR spectroscopy is used to measure rates of electron exchange between 1ox (27Al NMR: 72.2 ppm relative to Al(H2O)63+; ν1/2 = 0.77 Hz) and 1red (74.1 ppm; ν1/2 = 0.76 Hz). Bimolecular rate constants, k, are obtained from line broadening in 27Al NMR signals as ionic strength, μ, is increased by addition of NaCl at the slow-exchange limit of the NMR time scale. The dependence of k on μ is plotted using the extended Debye−Hückel equation: log k = log k0 + 2αz1z2μ1/2/(1 + βrμ1/2), where z1 and z2 are the charges of 1ox and 1red, α and β are constants, and r, the distance of closest contact, is fixed at 1.12 nm, the crystallographic diameter of a Keggin anion. Although not derived for highly charged ions, this equation gives a straight line (R2 = 0.996), whose slope gives a charge product, z1z2, of 29 ± 2, statistically identical to the theoretical value of 30. Extrapolation to μ = 0 gives a rate constant k11 of (6.5 ± 1.5) × 10-3 M-1 s-1, more than 7 orders of magnitude smaller than the rate constant [(1.1 ± 0.2) × 105 M-1 s-1] determined by 31P NMR for self-exchange between PVW12O403- and its one-electron-reduced form, PVW12O404-. Sutin's semiclassical model reveals that this dramatic difference arises from the large negative charges of 1ox and 1red. These results, including independent verification of k11, recommend 1red as a well-behaved electron donor for investigating outer-sphere electron transfer to molecules or nanostructures in water, while addressing a larger issue, the prediction of collision rates between uniformly charged nanospheres, for which 1ox and 1red provide a working model.
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Instrumentation. UV−vis spectra were acquired using StellarNet Inc. EPP2000 spectrophotometers equipped with diode-array detectors and immersible fiber-optic probes. ... StellarNet Dip Probes

Evaluation of Photon Absorption in an Aqueous TiO2 Slurry Reactor Using Monte Carlo Simulations and Macroscopic Balance
Jesus Moreira, Benito Serran, Aaron Ortiz and Hugo de Lasa- Faculty of Engineering Science, Chemical Reactor Engineering Centre, The University of Western Ontario
The radiation field in an annular photocatalytic reactor is simulated using a Monte Carlo method (MC) for two TiO2 suspensions in water. Simulations are performed by using both the spectral distribution and the wavelength-averaged scattering and absorption coefficients. The Henyey−Greenstein phase function is adopted to represent forward, isotropic, and backward scattering modes. It is assumed that the UV lamp reflects the backscattered photons by the slurred medium. Photoabsorption rates using MC simulations and spectral distribution of the optical coefficients agree closely with experimental observations from a macroscopic balance. It is found that the scattering mode of the probability density function is not a critical factor for a consistent representation of the radiation field. MC simulation for the optimal catalyst concentration reveals that the maximum LVREA is reached at a concentration of 0.14 g L−1 for TiO2 Degussa P25. From this concentration, the apparent optical thickness is determined to be 2.8476 which is in agreement with the optimal one previously reported. This concentration is comparable to that determined experimentally for phenol photocatalytic degradation.Read more...


Soluble Narrow Band Gap and Blue Propylenedioxythiophene- Cyanovinylene Polymers as Multifunctional Materials for Photovoltaic and Electrochromic Applications
(Dry-Box Studies using spectrometer)
Barry C. Thompson,Young-Gi Kim, Tracy D. McCarley,and John R. Reynolds The George and Josephine Butler Polymer Research Laboratory and the Center for Macromolecular Science and Engineering, Department of Chemistry, University of Florida
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Removing Organic Compounds from Aqueous Medium via Wet Peroxidation by Gold Catalyst
Yi-Fan Han, Nopphawan Phonthammachai, Kanaparthi Ramesh, Ziyi Zhong and Tim White, Institute of Chemical and Engineering Sciences, 1, Pesek Road, Jurong Island, Singapore
A new heterogeneous Fenton-like system, consisting of supported Au catalysts and hydrogen peroxide, was proved to be effective in removing low level organic compounds (ca. 100 ppm) such as phenol, ethanol, formaldehyde, and acetone in aqueous solution. Among all gold catalysts the Au/hydroxyapatite (Au/HAp) exhibits the highest activity, and even better than the conventional iron ions exchanged zeolite (Fe/ZSM-5) catalyst. In particular, unlike the limited operational pH range (pH: 25) for the other heterogeneous Fenton catalysts such as Fe/ZSM-5, Au/HAp shows higher stability even in strong acid solution (pH 2), due to almost no leaching of active metal from supports into solution. It can be potentially applied in treating the industrial wastewaters with strong acidity and purifying drinking water. In addition, in the case of complete oxidation of phenol, a plausible route was suggested for deep understanding of this process.

StellarNet Color Analysis System-
The variation of H2O2 concentration during reaction was analyzed colorimetrically using a UV–vis spectrophotometer (Epp2000, StellarNet Inc.) after complexation with a TiOSO4/H2SO4 reagent (16). ...Pictured above BLACK-Comet-CXR color spectrophotometer, SL1  Halogen Krypton Light Source, R400-7-VIS Reflectance Probe, RPH1 Reflectance Probe Holder, and RS50 Reflection Standard


Bio-Science

Effects of trehalose and sorbitol on the activity and structure of Pseudomonas cepacia lipase: spectroscopic insight-July 2011
A Azizi, B Ranjbar, K Khajeh, T Ghodselahi, S Hoornam, H Mobasheri - International Journal of Biological Macromolecules, 2011
The stability of enzymes with no reduction in their catalytic activity still remains a critical issue in industrial applications. Naturally occurring osmolytes are commonly used as protein stabilizers. In this study we have investigated the effects of sorbitol and trehalose on the structural stability and activity of Pseudomonas cepacia lipase (PCL), using UV–visible, circular dichroism (CD) and fluorescence spectroscopy. Surface plasmon resonance (SPR) technique was used to trace changes in the refractive index and dielectric constant of the environment. The results revealed that catalytic activity and intrinsic fluorescence intensity of PCL increased in the presence of both osmolytes. Far-UV CD spectra indicated that the protein has undergone some conformational changes upon interacting with these osmolytes. Increasing the concentration of sorbitol led to changes in the refractive index and consequently the dielectric constant of environment; whereas in the case of trehalose, such changes were not significant. Unfavorable interactions of trehalose with protein surface induced higher preferential exclusion from the enzyme–water interface than that of sorbitol. Results of this report could give further insights about the stabilization mechanism of osmolytes... Then SPR absorption spectra of UV- Visible spectrometer, Stellar.net (Florida, USA) from 2 mm diameter optical fiber that transfers a non-polarized light beam (400 nm -850 nm) through samples to a CCD detector was measured. View PDF.

 

BBX32, An Arabidopsis B-box Protein, Functions in Light Signaling by Suppressing HY5-Regulated Gene Expression And Interacting with STH2 –June 2011
HE Holtan, S Bandong, CM Marion, L Adam, et al. Plant Physiology,  2011.

A B-box zinc finger protein, B-BOX32 (BBX32), was identified as playing a role in determining hypocotyl length during a large-scale functional genomics study. Further analysis revealed that seedlings overexpressing BBX32 display elongated hypocotyls in red, far-red and blue light, along with reduced cotyledon expansion in red light. Through comparative analysis of mutant and overexpression line phenotypes, including global expression profiling and growth curve studies, we demonstrate that BBX32 acts antagonistically to HY5. We further show that BBX32 interacts with STH2, another Bbox protein previously shown to interact with HY5. Based on these data, we propose that BBX32 functions downstream of multiple photoreceptors as a modulator of light responses. As such, BBX32 potentially has a native role in mediating gene repression to maintain dark adaptation... AR75L chamber (Percival) was used for white light. Fluence rates were measured using a spectroradiometer (EPP2000-VIS-50, StellarNet Inc). Hypocotyl and cotyledon area measurements were performed using digital images (Canon G9) analyzed with Image J.
View PDF.

 
Fig. 1.
Simplified model depicting a functional role of BBX32 in photomorphogenesis. The hypothetical model indicates that BBX32 interacts with STH2 and suppresses the activities of positive factors, STH2 and HY5, involved in photomorphogenesis that control multiple aspects of seedling de-etiolation, including light-regulated gene expression and cell expansion.


Dimerization and blue light regulation of PIF1 interacting bHLH proteins in Arabidopsis -September 2011
Q Bu, A Castillon, F Chen, L Zhu, et al. –Plant Molecular Biology
Phytochrome Interacting Factor 1 (PIF1), a basic helix-loop-helix (bHLH) protein, functions as a negative regulator of various facets of photomorphogenesis. To indentify PIF1-interacting proteins, we performed yeast two-hybrid screening using PIF1 as a bait and identified a group of proteins including PIF1 itself, PIF3 and long hypocotyl in far-red 1 (HFR1), an atypical HLH protein. Directed yeast two-hybrid interaction assays showed that PIF1 can form heterodimers with all other PIFs as well as with HFR1. PIF1 and PIF3 interacted with each other in both in vitro and in vivo co-immunoprecipitation assays. PIF1-PIF3 heterodimer also bound to a G-box DNA sequence element in vitro. To understand the biological significance of these interactions, a pif1pif3 double mutant was obtained and characterized. Analyses of the single and double mutants showed that PIF3 plays a prominent role in repressing photomorphogenesis under continuous blue light conditions. pif1 and pif3 showed additive phenotypes more prominently under discontinuous blue light conditions. Similar to PIF1, PIF3 was also rapidly phosphorylated, poly-ubiquitylated and degraded in response to blue light. PIF3 also interacted with phytochromes in response to blue light. A PIF3 mutant defective in interaction with both phyA and phyB displayed reduced degradation under blue light, suggesting that phy-interaction was necessary for the blue light-induced degradation of PIF3. Taken together, these data suggest a combinatorial control of photomorphogenesis by bHLH proteins in response to light in Arabidopsis. ... 2009; Shen et al. 2005). Light fluence rates were measured using a spectroradiometer (Model EPP2000, StellarNet Inc., Tampa, FL) as described (Cast- illon et al. 2009; Shen et al. 2005). Adult plants were Plant Mol Biol 123 Page 3. View PDF.

Collective Character of Previtamin D cis-trans Isomerization in Liquid-Crystalline Matrices-June 2011
Irina Terenetskaya & Tetiana Orlova - Molecular Crystals and Liquid Crystals, Vol. 541, Iss. 1, 2011
Significant increase of the previtamin D cis-trans isomerization efficiency with increased concentration of initial provitamin D was observed in both nematic and cholesteric LCs at room temperature, but the effect revealed reduced progressively with heating, and in isotropic phase it disappeared. The results obtained indicate on the collective character of cis-trans isomerization in liquid crystals due to the ordering of LCs. Here we present our results on the dynamics of the cholesteric phase induction and its propagation in response to the UV-induced geometry change of the provitamin D dopant molecule... The power of the incident radiation was measured with the calibrated spectrometer EPP2000C-UV+VIS (StellarNet Inc.), and in the sample plane it amounted to 0.3 mW/cm 2…
View PDF.

Skin Lesions Classification with Optical Spectroscopy - September 2010
A. Safi, V. Castaneda, T. Lasser, N. Navab- Technische Universität München, Germany
Diagnosis of benign and malign skin lesions is currently mostly relying on visual assessment and frequent biopsies performed by dermatologists. As the timely and correct diagnosis of these skin lesions is one of the most important factors in the therapeutic outcome, leveraging new technologies to assist the dermatologist seems natural. Complicating matters is a blood cancer called Cutaneous T-Cell Lymphoma, which also exhibits symptoms as skin lesions. We propose a framework using optical spectroscopy and a multi-spectral classification scheme using support vector machines to assist dermatologists in diagnosis of normal, benign and malign skin lesions. As a first step we show successful classification (94.9%) of skin lesions from regular skin in 48 patients based on 436 measurements. This forms the basis for future automated classification of different skin lesions in diseased patients. View PDF...
                
(a) Schematic of the fiber arrangement in the spectroscopy probe: 6×200μm illumination fibers arrayed around one 600μm acquisition fiber. (b) System setup: (1) tracking cameras, (2) regular camera (for augmented reality visualization), (3) tracked probe, (4) spectrometer, (5) light source, and (6) data–processing unit. The right Graph of all normalized spectra from the training data set T, color-coded as blue for skin moles, red mole cancer and green for normal skin.


The emerging roles of melanopsin in behavioral adaptation to light- August 30, 2010
Megumi Hatori and Satchidananda Panda- The Salk Institute for Biological Studies
The adaptation of behavior and physiology to changes in the ambient light level is of crucial importance to life. These adaptations include the light modulation of neuroendocrine function and temporal alignment of physiology and behavior to the day:night cycle by the circadian clock. These non-image-forming (NIF) responses can function independent of rod and cone photoreceptors but depend on ocular light reception, suggesting the participation of novel photoreceptors in the eye. The discovery of melanopsin in intrinsically photosensitive retinal ganglion cells (ipRGCs) and genetic proof for its important role in major NIF responses have offered an exciting entry point to comprehend how mammals adapt to the light environment. Here, we review the recent advances in our understanding of the emerging roles of melanopsin and ipRGCs. These findings now offer new avenues to understand the role of ambient light in sleep, alertness, dependent physiologies and potential pharmacological intervention as well as lifestyle modifications to improve the quality of life.... The emission spectra for popular fluorescent lamps (black line) used for indoor lighting and sunlight (gray line; two hours after sunrise in San Diego, April 2010) were measured and analyzed using a BLUE-Wave UV–VIS spectrometer and SpectraWiz software (StellarNet Inc.). ... Read more...


Microbial UV Fluence-Response Assessment using a Novel UV-LED Collimated Beam System -  December 2010
C Bowker, J Ducoste, A Sain, and Max Shatalov Hazen and Sawyer, Department of Civil, Construction, and Environmental Engineering, North Carolina State University, Sensor Electronic Technology, Inc. SC.

A research study has been performed to determine the ultraviolet (UV) fluence-response of several target non-pathogenic microorganisms to UV light emitting diodes (UV-LEDs) by performing collimated beam tests. UV-LEDs do not contain toxic mercury, offer design flexibility due to their small size, and have a longer operational life than mercury lamps. Comsol Multiphysics was utilized to create an optimal UV-LED collimated beam design based on number and spacing of UV-LEDs and distance of the sample from the light source while minimizing the overall cost. The optimized UV-LED collimated beam apparatus and a low-pressure mercury lamp collimated beam apparatus were used to determine the UV fluence-response of three surrogate microorganisms (E. coli, MS-2, T7) to 255 nm UV-LEDs, 275 nm UV-LEDs, and 254 nm low-pressure mercury lamps. Irradiation by low-pressure mercury lamps produced greater E. coli and MS-2 inactivation than 255 nm and 275 nm UV-LEDs and similar T7 inactivation to irradiation by 275 nm UV-LEDs. The 275 nm UV-LEDs produced more efficient T7 and E. coli inactivation than 255 nm UV-LEDs while both 255 nm and 275 nm UV-LEDs produced comparable microbial inactivation for MS-2. Differences may have been caused by a departure from the time-dose reciprocity law due to microbial repair mechanisms.
... 167 The incident irradiance at the surface of the liquid sample was found for the UV-168 LED experiments using a Stellarnet BLACK-Comet-100 Spectroradiometer with an attached 169 fiber optic probe to capture fine planar variations in light intensity calibrated at both 255 170


Kinetic and thermodynamic study of the reaction catalyzed by glucose-6-phosphate dehydrogenase with nicotinamide adenine dinucleotide-January 2011
JS Martín del Campo and Rodrigo Patiño - Thermochimica Acta.
The enzyme glucose-6-phosphate dehydrogenase (G6PD, EC 1.1.1.49) from Leuconostoc mesenteroides has a dual coenzyme specificity with oxidized nicotinamide adenine dinucleotide (NADox) and oxidized nicotinamide adenine dinucleotide phosphate as electron acceptors. The G6PD coenzyme selection is determined by the metabolic cellular prevailing conditions. In this study a kinetic and thermodynamic analysis is presented for the reaction catalyzed by G6PD from L. mesenteroides with NADox as coenzyme in phosphate buffer. For this work, an in situ spectrophotometric technique was employed based on the detection of one product of the reaction. Substrate and coenzyme concentrations as well as temperature and pH effects were evaluated. The apparent equilibrium constant, the Michaelis constant, and the turnover number were determined as a function of each experimental condition. The standard transformed Gibbs energy of reaction was determined from equilibrium constants at different initial conditions. For the product 6-phospho-d-glucono-1,5-lactone, a value of the standard Gibbs energy of formation is proposed, ΔfG = −1784 ± 5 kJ mol−1.
The evolution of the reaction was followed in real time, monitoring the NAD red product formation with a maximum of absorption at 340 nm of wavelength, through an optical probe connected to a spectrophotometer (BLUE-Wave, StellarNet) with 0.20 or 2.0 cm of cell length.

Phosphorylation by CK2 enhances the rapid light-induced degradation of PHYTOCHROME INTERACTING FACTOR 1 in Arabidopsis –February 2011
Q Bu, L Zhu, MD Dennis, L Yu, SX Lu… - Journal of Biological, 2011
The phytochrome family of sensory photoreceptors interacts with Phytochrome Interacting Factors (PIFs), repressors of photomorphogenesis, in response to environmental light signals and induces rapid phosphorylation and degradation of PIFs to promote photomorphogenesis. However, the kinase that phosphorylates PIFs is still unknown. Here we show that CK2 directly phosphorylates PIF1 at multiple sites. α1 and α2 subunits individually phosphorylated PIF1 weakly in vitro. However, each of four β subunits strongly stimulated phosphorylation of PIF1 by α1 or α2. Mapping of the phosphorylation sites identified 7 Ser/Thr residues scattered throughout PIF1. Ser/Thr to Ala scanning mutations at all 7 sites eliminated CK2-mediated phosphorylation of PIF1 in vitro. Moreover, the rate of degradation of the Ser/Thr to Ala mutant PIF1 was significantly reduced compared to wild type PIF1 in transgenic plants. In addition, hypocotyls lengths of the mutant PIF1 transgenic plants were much longer than the wild type PIF1 transgenic plants under light, suggesting that the mutant PIF1 is suppressing photomorphogenesis. Taken together, these data suggest that CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis. Plant Growth Conditions and Phenotypic Analyses- Plants were grown in Metro-Mix 200 soil (Sun Gro Horticulture, Bellevue, WA) under constant light at 24 °C ± 0.5°C. Monochromatic R and FR light sources and the spectroradiometer (Model BLUE-Wave, StellarNet Inc., Tampa ). View PDF.


Supplementary Figure: LUC-PIF1(S464-466A) mutant promotes hypocotyl elongation under red light. Photographs showing hypocotyl lengths of various genotypes including two independent alleles of LUC-PIF1(S464-466A) transgenic plants. Seedlings were grown for four days in the dark or one day in the dark followed by three days under red light (7 ìmolm-2s-1). Bar= 5 mm.


Deactivation of A549 cancer cells in vitro by a dielectric barrier discharge plasma needle-March 2011
J Huang, W Chen, H Li, XQ Wang, GH Lv… - Journal of Applied Physics, 2011
An inactivation mechanism study on A549 cancer cells by means of a dielectric barrier discharge plasma needle is presented. The neutral red uptake assay provides a quantitative estimation of cell viability after plasma treatment. Experimental results show that the efficiency of argon plasma for the inactivation process is very dependent on power and treatment time. A 27 W power and 120 s treatment time along with 900 standard cubic centimeter per minute Ar flow and a nozzle-to-sample separation of 3 mm are the best parameters of the process. According to the argon emission spectra of the plasma jet and the optical microscope images of the A549 cells after plasma treatment, it is concluded that the reactive species (for example, OH and O) in the argon plasma play a major role in the cell deactivation. ... They were quite useful for diagnostic purposes. Figure is a typical UV-visible emission spectrum (Stellarnet, BLACK-Comet in the 200–850 nm regions from sine wave ac driven (11.55 kHz) DBD plasma at atmospheric pressure.

A novel high-throughput in vivo molecular screen for shade avoidance mutants identifies a novel phyA mutation -March 2011
X Wang, I Roig-Villanova, S Khan, H Shanahan… - Journal of Experimental Botany …, 2011
The shade avoidance syndrome (SAS) allows plants to anticipate and avoid shading by neighbouring plants by initiating an elongation growth response. The phytochrome photoreceptors are able to detect a reduction in the red: far red ratio in incident light, the result of selective absorption of red and blue wavelengths by proximal vegetation. A shade-responsive luciferase reporter line (PHYB::LUC) was used to carry out a high-throughput screen to identify novel SAS mutants. The dracula 1 (dra1) mutant, that showed no avoidance of shade for the PHYB::LUC response, was the result of a mutation in the PHYA gene. Like previously characterized phyA mutants, dra1 showed a long hypocotyls in far red light and an enhanced hypocotyl elongation response to shade. However, dra1 additionally showed a long hypocotyl in red light. Since phyB levels are relatively unaffected in dra1, this gain-of-function red light phenotype strongly suggests a disruption of phyB signalling. The dra1 mutation, G773E within the phyA PAS2 domain, occurs at a residue absolutely conserved among phyA sequences. The equivalent residue in phyB is absolutely conserved as a threonine. PAS domains are structurally conserved domains involved in molecular interaction. Structural modelling of the dra1 mutation within the phyA PAS2 domain shows some similarity with the structure of the phyB PAS2 domain, suggesting that the interference with phyB signalling may be the result of non-functional mimicry. Hence, it was hypothesized that this PAS2 residue forms a key distinction between the phyA and phyB phytochrome species.... All light measurements were made using a StellarNet EPP2000-HR spectroradiometer.  Luciferase imaging. Following 6 d growth in constant white light, seedlings were sprayed with 1 mM d-luciferin dissolved in 0.01% Triton (1 ml per plate).

Tar analysis from biomass gasification by means of online fluorescence spectroscopy- March 2011
C Baumhakla and Sotirios Karellasb - Optics and Lasers in Engineering, 2011
Optical methods in gas analysis are very valuable mainly due to their non-intrusive character. That gives the possibility to use them for in-situ or online measurements with only optical intervention in the measurement volume. In processes like the gasification of biomass, it is of high importance to monitor the gas quality in order to use the product gas in proper machines for energy production following the restrictions in the gas composition but also improving its quality, which leads to high efficient systems. One of the main problems in the biomass gasification process is the formation of tars. These higher hydrocarbons can lead to problems in the operation of the energy system. Up to date, the state of the art method used widely for the determination of tars is a standardized offline measurement system, the so-called “Tar Protocol”. The aim of this work is to describe an innovative, online, optical method for determining the tar content of the product gas by means of fluorescence spectroscopy. This method uses optical sources and detectors that can be found in the market at low cost and therefore it is very attractive, especially for industrial applications where cost efficiency followed by medium to high precision are of high importance… On the opposite window a laser beam dump was mounted. To detect the fluorescence signal a compact UV/vis concave grating spectrometer "BLACK-Comet" of the company StellarNet Inc. [23] is used.

Identification and Discrimination of Bacterial Strains by Laser Induced Breakdown Spectroscopy and Neural Networks-March
D Marcos-Martinez, JA Ayala, RC Izquierdo-Hornillosa, F.J. Manuel de Villenaa and J.O. Caceresa  - Talanta, Departamento de Química Analítica. Facultad de Ciencias Químicas Universidad Complutense, Centro de Biología Molecular ”Severo Ochoa”, Madrid Spain.
A method based on Laser Induced Breakdown Spectroscopy (LIBS) and neural networks (NNs) has been developed and applied to the identification and discrimination of specific bacteria strains. (Pseudomonas aeroginosa, Escherichia coli and Salmonella typhimurium). Instant identification of the samples is achieved using a spectral library, which was obtained by analysis using a single laser pulse of representative samples and treatment by neural networks. The samples used in this study were divided into three groups, which were prepared on three different days. The results obtained allow the identification of the bacteria tested with a certainty of over 95%, and show that only a difference between the bacteria can cause identification. Single-shot measurements were sufficient for clear identification of the bacterial strains studied. The method can be developed for automatic real time, fast, reliable and robust measurements and can be packaged in portable systems for non-specialist users. ... The spectrometer 9 system was a user-configured miniature single-fiber system (BLUE-Wave,  StellarNet, Tampa, FL, 10 USA) with a gated CCD detector. A grating of 300 l/mm was selected; a spectral resolution of 0.5 11 nm was achieved with a 7 m entrance slit.

Physical and Microbiological Characterisation of Staphylococcus epidermidis Inactivation by Dielectric Barrier Discharge Plasma-March 2011
A Helmke, D Hoffmeister, F Berge, S Emmert, P Laspe, N Mertens, W Vioel, and Klaus-Dieter Weltmann - Plasma Processes and Polymers.
The inactivation of the Gram-positive bacteria Staphylococcus epidermidis (ATCC 12228) in its vegetative state was studied in vitro after exposure to cold atmospheric pressure plasma generated by direct dielectric barrier discharge (DBD). Compared to UV radiation at 254nm, plasma UV emission yielded no significant contribution to bacterial inactivation. Analysis of bacterial growth inhibition revealed a pH dependency on growth media. Yet, measurements combined with numerical simulations excluded the pH shift induced by plasma generated reactive species as the main cause of bacterial inactivation. Scanning electron microscopy (SEM) images showed no alteration of cell walls, while fluorescence microscopy revealed lethal damage to cell membranes even after 1s treatment. When the cell membrane was already severely damaged, also degradation of the bacterial DNA by plasma treatment was found. We conclude that membrane damage due to reactive oxygen species (ROS) and DNA degradation are the main mechanisms of plasma-induced bacterial death that is aggregated by milieu acidification. ... Spectroscopy and Fluorescence Microscopy Optical emission spectroscopy (OES) measurements of the plasma and the UV source were carried out using a concave grating miniature spectrometer BLACK-Comet (StellarNet Inc., Tampa, Florida) operating in the wavelength region 190–850 nm.

Interferon-[ggr] links ultraviolet radiation to melanomagenesis in mice
MR Zaidi, S Davis, FP Noonan, C Graff-Cherry… - Nature 469, 548–553 (27 January 2011)
Cutaneous malignant melanoma is a highly aggressive and frequently chemoresistant cancer, the incidence of which continues to rise. Epidemiological studies show that the major aetiological melanoma risk factor is ultraviolet (UV) solar radiation, with the highest risk associated with intermittent burning doses, especially during childhood
1, 2. We have experimentally validated these epidemiological findings using the hepatocyte growth factor/scatter factor transgenic mouse model, which develops lesions in stages highly reminiscent of human melanoma with respect to biological, genetic and aetiological criteria, but only when irradiated as neonatal pups with UVB, not UVA3, 4. However, the mechanisms underlying UVB-initiated, neonatal-specific melanomagenesis remain largely unknown. Here we introduce a mouse model permitting fluorescence-aided melanocyte imaging and isolation following in vivo UV irradiation. We use expression profiling to show that activated neonatal skin melanocytes isolated following a melanomagenic UVB dose bear a distinct, persistent interferon response signature, including genes associated with immunoevasion. UVB-induced melanocyte activation, characterized by aberrant growth and migration, was abolished by antibody-mediated systemic blockade of interferon-γ (IFN-γ), but not type-I interferons. IFN-γ was produced by macrophages recruited to neonatal skin by UVB-induced ligands to the chemokine receptor Ccr2. Admixed recruited skin macrophages enhanced transplanted melanoma growth by inhibiting apoptosis; notably, IFN-γ blockade abolished macrophage-enhanced melanoma growth and survival. IFN-γ-producing macrophages were also identified in 70% of human melanomas examined. Our data reveal an unanticipated role for IFN-γ in promoting melanocytic cell survival/immunoevasion, identifying a novel candidate therapeutic target for a subset of melanoma patients. ... uniformity. The irradiance is measured with a spectroradiometer (StellarNet) and under standard conditions regularly produces an irradiance of approximately 0.30 CIE-effective W m −2 .



Chitosan Films Doped with Gold Nanorods as Laser-Activatable Hybrid Bioadhesives- August 23, 2010
P Matteini, F Ratto, F Rossi, S Centi, L Dei, R Pini - Advanced Materials
Biocompatible chitosan/gold nanorods films are fabricated and tested as laser-activatable adhesives. When exposed to near-infrared laser light the nanoparticles carry out efficient photothermal conversion, which activates the polar groups of chitosan strands and mediates functional adhesion with a biological tissue. This technology may enable a number of key applications in medicine including tissue repair, wound dressing and drug delivery.  Read more...



Modification of light sources for appropriate biological action- June 16 2010
R Kozakov, H Schöpp, St Franke, C Stoll and D Kunz- Leibniz Institute of Plasma Science and Technology- Charité–Universitymedicine Berlin
The impact of the non-visual action of light on the design of novel light sources is discussed. Therefore possible modifications of lamps dealing with spectral tailoring and their action on melatonin suppression in usual life situations are investigated. The results of melatonin suppression by plasma lamps are presented. It is shown that even short-time exposure to usual light levels in working areas has an influence on the melatonin onset. ... The luminance in their field of view was measured with a calibrated luminance measurement camera. The spectrum of light was recorded with the help of a compact spectroradiometer (EPP-2000, StellarNet- now BLACK-Comet) in the range between 300 and 800nm. ...Read more...

In vivo
carotid artery closure by laser activation of hyaluronan-embedded gold nanorods-  July 6, 2010
Paolo Matteini, Fulvio Ratto, Francesca Rossi, Giacomo Rossi, Giuseppe Esposito, Alfredo Puca, Alessio Albanese, and Giulio Maira- Institute of Applied Physics “Nello Carrara”, Italian National Research Council- University of Camerino, Faculty of Veterinary Medicine- Catholic University School of Medicine, Institute of Neurosurgery
We prove the first application of near-infrared-absorbing gold nanorods (GNRs) for in vivo laser closure of a rabbit carotid artery. GNRs are first functionalized with a biopolymeric shell and then embedded in hyaluronan, which gives a stabilized and handy laser-activable formulation. Four rabbits undergo closure of a 3-mm longitudinal incision performed on the carotid artery by means of a 810-nm diode laser in conjunction with the topical application of the GNRs composite. An effective surgery is obtained by using a 40-W/cm2 laser power density. The histological and electron microscopy evaluation after a 30-day follow-up demonstrates complete healing of the treated arteries with full re-endothelization at the site of GNRs application. The absence of microgranuloma formation and/or dystrophic calcification is evidence that no host reaction to nanoparticles interspersed through the vascular tissue occurred. The observation of a reshaping and associated blue shift of the NIR absorption band of GNRs after laser treatment supports the occurrence of a self-terminating process, and thus of additional safety of the minimally invasive laser procedure. This study underlines the feasibility of using GNRs for in vivo laser soldering applications, which represents a step forward toward the introduction of nanotechnology-based therapies in minimally invasive clinical practices. ... After irradiation, the samples were subject to spectromicroscopy by a homemade setup composed of a transmission microscope (model DM 2500 by Leica Microsystems GmbH, Germany), a visible-NIR spectrometer (model EPP200 by Stellarnet Incorporated, Tampa, Florida ... Read More...

A Synthetic Genetic Edge Detection Program- June 2009
Jeffrey J. Tabor, Howard Salis, Zachary B. Simpson, Aaron A. Chevalier, Anselm Levskaya, Edward M. Marcotte, Christopher A. Voigt, and Andrew D. Ellington-Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco,Center for Systems and Synthetic Biology and Institute for Cell and Molecular Biology, Department of Chemistry and Biochemistry, University of Texas, Austin, TX.
Edge detection is a signal processing algorithm common in artificial intelligence and image recognition programs. We have constructed a genetically encoded edge detection algorithm that programs an isogenic community of E.coli to sense an image of light, communicate to identify the light-dark edges, and visually present the result of the computation. The algorithm is implemented using multiple genetic circuits. An engineered light sensor enables cells to distinguish between light and dark regions. In the dark, cells produce a diffusible chemical signal that diffuses into light regions. Genetic logic gates are used so that only cells that sense light and the diffusible signal produce a positive output. A mathematical model constructed from first principles and parameterized with experimental measurements of the component circuits predicts the performance of the complete program. Quantitatively accurate models will facilitate the engineering of more complex biological behaviors and inform bottom-up studies of natural genetic regulatory networks.  The images projected onto the slabs have power characteristics of 0.08 to 0.15W/m2 in the 620-680nm band as determined by a EPP2000C Concave Grating spectrometer (StellarNet, Oldsmar, FL). View PDF…
 
 

Cryptochrome 2 and phototropin 2 regulate resistance protein-mediated viral defense by negatively regulating an E3 ubiquitin ligase- June 11, 2010
Rae-Dong Jeong, A. C. Chandra-Shekara, Subhankar Roy Barman, Duroy Navarre, Daniel F. Klessig, Aardra Kachroo, Pradeep Kachroo
Light harvested by plants is essential for the survival of most life forms. This light perception ability requires the activities of proteins termed photoreceptors. We report a function for photoreceptors in mediating resistance (R) protein-derived plant defense. The blue-light photoreceptors, cryptochrome (CRY) 2 and phototropin (PHOT) 2, are required for the stability of the R protein HRT, and thereby resistance to Turnip Crinkle virus (TCV). Exposure to darkness or blue-light induces degradation of CRY2, and in turn HRT, resulting in susceptibility. Overexpression of HRT can compensate for the absence of PHOT2 but not CRY2. HRT does not directly associate with either CRY2 or PHOT2 but does bind the CRY2-/PHOT2-interacting E3 ubiquitin ligase, COP1. Application of the proteasome inhibitor, MG132, prevents blue-light-dependent degradation of HRT, consequently these plants show resistance to TCV under blue-light. We propose that CRY2/PHOT2 negatively regulate the proteasome-mediated degradation of HRT, likely via COP1, and blue-light relieves this repression resulting in HRT degradation. Read more...

Voltage-dependent Dynamic FRET Signals from the Transverse Tubules in Mammalian Skeletal Muscle Fibers- December 2007
Marino DiFranco, Joana Capote, Marbella Quiñonez, and Julio L. Vergara
Two hybrid voltage-sensing systems based on fluorescence resonance energy transfer (FRET) were used to record membrane potential changes in the transverse tubular system (TTS) and surface membranes of adult mice skeletal muscle fibers. Farnesylated EGFP or ECFP (EGFP-F and ECFP-F) were used as immobile FRET donors, and either non-fluorescent (dipicrylamine [DPA]) or fluorescent (oxonol dye DiBAC4(5)) lipophilic anions were used as mobile energy acceptors. Flexor digitorum brevis (FDB) muscles were transfected by in vivo electroporation with pEGFP-F and pECFP-F. Farnesylated fluorescent proteins were efficiently expressed in the TTS and surface membranes. Voltage-dependent optical signals resulting from resonance energy transfer from fluorescent proteins to DPA were named QRET transients, to distinguish them from FRET transients recorded using DiBAC4(5). The peak ΔF/F of QRET transients elicited by action potential stimulation is twice larger in fibers expressing ECFP-F as those with EGFP-F (7.1% vs. 3.6%). These data provide a unique experimental demonstration of the importance of the spectral overlap in FRET. The voltage sensitivity of QRET and FRET signals was demonstrated to correspond to the voltage-dependent translocation of the charged acceptors, which manifest as nonlinear components in current records. For DPA, both electrical and QRET data were predicted by radial cable model simulations in which the maximal time constant of charge translocation was 0.6 ms. FRET signals recorded in response to action potentials in fibers stained with DiBAC4(5) exhibit ΔF/F amplitudes as large as 28%, but their rising phase was slower than those of QRET signals. Model simulations require a time constant for charge translocation of 1.6 ms in order to predict current and FRET data. Our results provide the basis for the potential use of lipophilic ions as tools to test for fast voltage-dependent conformational changes of membrane proteins in the TTS. The fluorescence spectra of EGFP-F and ECFP-F were measured in vivo from isolated fibers mounted in the fluorescence microscope described above but additionally equipped with a fiber optic–coupled spectrofluorimeter (EPP2000, StellarNet). 
View PDF…

Membrane expression of EGFPF and ECFP-F in FDB muscle fi bers. (A) TPLSM image section obtained at the medial plane of a muscle fi ber expressing EGFP-F. n denotes nucleus; arrowheads point to the cytoplasmic side of a nucleus; arrows point toward areas of increased fl uorescence close to the poles of nuclei. (B) Fluorescence intensity profi le obtained from the area delimited by the white rectangle in A. (C and D) TPLSM image sections of an FDB muscle transfected with pECFP-F and stained extracellularly with di-8-ANEPPS. ECFP-F and di-8-ANEPPS fl uorescence images are shown in C and D, respectively. (E) Superimposition of image sections in C and D. (F) Normalized fluorescence intensity profi les measured from the area delimited by the rectangles in Fig. 2, C (cyan trace) and D (red trace). The vertical calibration bar is 20μm and applies to all the images.


Characterization of the Effects of Aryl-azido Compounds and UVA Irradiation on the Viral Proteins and Infectivity of Human Immunodeficiency Virus Type 1- July 12, 2010
Julie M. Belanger, Yossef Raviv, Mathias Viard, Michael Jason de la Cruz, Kunio Nagashima, Robert Blumenthal
Hydrophobic UV-activatable compounds have been shown to partition into the hydrophobic region of biological membranes to selectively label transmembrane proteins, and to inactivate enveloped viruses. Here, we analyze various UV-activatable azido- and iodo-based hydrophobic compounds for their ability to inactivate a model-enveloped virus, human immunodeficiency virus (HIV-1 MN). Treatment of HIV-1 with 1,5-diazidonapthalene (DAN), 1-iodo, 5-azidonaphthalene (INA), 1-azidonaphthalene (AzNAP) or 4,4′-diazidobiphenyl (DABIPH) followed by UVA irradiation for 2 min resulted in complete viral inactivation, whereas treatment using analogous non–azido-containing controls had no effect. Incorporation of an azido moiety within these hydrophobic compounds to promote photoinduced covalent reactions with proteins was found to be the primary mechanism of viral inactivation for this class of compounds. Prolonged UVA irradiation of the virus in the presence of these azido compounds resulted in further modifications of viral proteins, due to the generation of reactive oxygen species, leading to aggregation as visualized via Western blot analysis, providing additional viral modifications that may inhibit viral infectivity. Furthermore, inactivation using these compounds resulted in the preservation of surface antigenic structures (recognized by neutralizing antibodies b12, 2g12 and 4e10), which is favorable for the creation of vaccines from these inactivated virus preparations.... polypropylene microfuge tubes. The UV emission from the light source was measured using a Stellarnet Spectroradiometer and was found to have the mercury emission lines where k > 335 nm (data not shown). Read more...

Blue Light Induces Degradation of the Negative Regulator Phytochrome Interacting Factor 1 to Promote Photomorphogenic Development of Arabidopsis Seedlings -Febuary 2009
Alicia Castillon, Hui Shen1 and Enamul Huq
Phytochrome interacting factors (PIFs) are nuclear basic helix-loop-helix (bHLH) transcription factors that negatively regulate photomorphogenesis both in the dark and in the light in Arabidopsis. The phytochrome (phy) family of photoreceptors induces the rapid phosphorylation and degradation of PIFs in response to both red and far-red light conditions to promote photomorphogenesis. Although phys have been shown to function under blue light conditions, the roles of PIFs under blue light have not been investigated in detail. Here we show that PIF1 negatively regulates photomorphogenesis at the seedling stage under blue light conditions. pif1 seedlings displayed more open cotyledons and slightly reduced hypocotyl length compared to wild type under diurnal (12 hr light/12 hr dark) blue light conditions. Double-mutant analyses demonstrated that pif1phyA, pif1phyB, pif1cry1, and pif1cry2 have enhanced cotyledon opening compared to the single photoreceptor mutants under diurnal blue light conditions. Blue light induced the rapid phosphorylation, polyubiquitination, and degradation of PIF1 through the ubi/26S proteasomal pathway. PIF1 interacted with phyA and phyB in a blue light-dependent manner, and the interactions with phys are necessary for the blue light-induced degradation of PIF1. phyA played a dominant role under pulses of blue light, while phyA, phyB, and phyD induced the degradation of PIF1 in an additive manner under prolonged continuous blue light conditions. Interestingly, the absence of cry1 and cry2 enhanced the degradation of PIF1 under blue light conditions. Taken together, these data suggest that PIF1 functions as a negative regulator of photomorphogenesis under blue light conditions and that blue light-activated phys induce the degradation of PIF1 through the ubi/26S proteasomal pathway to promote photomorphogenesis. Light fluence rates were measured using a spectroradiometer (model EPP2000; StellarNet, Tampa, FL). View PDF…


Wavelength specificity of the LED light sources used for experiments in this study. Measured by StellarNet LED Measurement system.

Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins - Oct 2007
Irma Roig-Villanova
, Jordi Bou-Torrent, Anahit Galstyan, Lorenzo Carretero-Paulet, Sergi Portoles, Manuel Rodrı´guez-Concepcio, and Jaime F Martı´nez-Garcı´a
Plants sense the presence of potentially competing nearby individuals as a reduction in the red to far-red ratio of the incoming light. In anticipation of eventual shading, a set of plant responses known as the shade avoidance syndrome (SAS) is initiated soon after detection of this signal by the phytochrome photoreceptors. Here we analyze the function of PHYTOCHROME RAPIDLY REGULATED1 (PAR1) and PAR2, two Arabidopsis thaliana genes rapidly upregulated after simulated shade perception. These genes encode two closely related atypical basic helix–loop–helix proteins with no previously assigned function in plant development. Using reverse genetic approaches, we show that PAR1 and PAR2 act in the nucleus to broadly control plant development, acting as negative regulators of a variety of SAS responses, including seedling elongation and photosynthetic pigment accumulation. Molecularly, PAR1 and PAR2 act as direct transcriptional repressors of two auxin-responsive genes, SMALL AUXIN UPREGULATED15 (SAUR15) and SAUR68. Additional results support that PAR1 and PAR2 function in integrating shade and hormone transcriptional networks, rapidly connecting phytochrome-sensed light changes with auxin responsiveness. Fluence rates were measured using an EPP2000 spectrometer (StellarNet Inc.,Tampa, FL, USA). View PDF…

Human Pigmentation Variation: Evolution, Genetic Basis, and Implications for Public Health
Esteban J. Parra- Department of Anthropology, University of Toronto at Mississauga
Pigmentation, which is primarily determined by the amount, the type, and the distribution of melanin, shows a remarkable diversity in human populations, and in this sense, it is an atypical trait. Numerous genetic studies have indicated that the average proportion of genetic variation due to differences among major continental groups is just 10–15% of the total genetic variation. In contrast, skin pigmentation shows large differences among continental populations. The reasons for this discrepancy can be traced back primarily to the strong influence of natural selection, which has shaped the distribution of pigmentation according to a latitudinal gradient. Research during the last 5 years has substantially increased our understanding of the genes involved in normal pigmentation variation in human populations. At least six genes have been identified using genotype/phenotype association studies and/or direct functional assays, and there is evidence indicating that several additional genes may be playing a role in skin, hair, and iris pigmentation. The information that is emerging from recent studies points to a complex picture where positive selection has been acting at different genomic locations, and for some genes only in certain population groups. Diffuse reflectance spectroscopy (DRS) is considered the most versatile and accurate noninvasive strategy to measure skin pigmentation (Stamatas et al., 2004).
  
Skin reflectance curves for individuals of European, East Asian, South Asian, and African ancestry. Skin reflectance was measured on the inner upper arm at 0.5-nm intervals along the visible spectrum (400–700 nm) using a Stellarnet EPP2000 (now BLACK-Comet) reflectance spectrometer. Note the decrease in skin reflectance in the green yellow wavelengths (540–580 nm) due to hemoglobin absorption, which is particularly evident in the curves of the individuals with the highest skin reflectance.

Extinction Cross-Section Measurements of Bacillus globigii Aerosols
Suzanne C. Walts, Craig A. Mitchell, Michael E. Thomas, and Donald D. Duncan
In a continuing series of experiments designed to determine the spectral extinction cross section of bacterial aerosols,  spectral transmittance was measured as a function of particle concentration, and extinction cross sections were calculated. Visible band measurements of Bacillus globigii aerosols indicated a slight increase in the extinction cross section with increasing wavelength. The extinction cross section was estimated to be 2.58 (±0.25)10 8 cm 2 at the 543-nm wavelength. View PDF

Transmittance versus wavelength for varying concentrations of Bacillus Globigii. Curves are broadband spectrometer results and boxes are laser results that calibrate the curves.

Mitochondrial succinic-semialdehyde dehydrogenase of the γ-aminobutyrate shunt is required to restrict levels of reactive oxygen intermediates in plants
Nicolas Bouché, Aaron Fait, David Bouchez, Simon G. Møller, Hillel Fromm
The γ-aminobutyrate (GABA) shunt is a metabolic pathway that bypasses two steps of the tricarboxylic acid cycle, and it is present in both prokaryotes and eukaryotes. In plants the pathway is composed of the calcium/calmodulin-regulated cytosolic enzyme glutamate decarboxylase and the mitochondrial enzymes GABA transaminase and succinic-semialdehyde dehydrogenase (SSADH). The activity of the GABA shunt in plants is rapidly enhanced in response to various biotic and abiotic stresses. However the physiological role of this pathway remains obscure. To elucidate its role in plants, we analyzed Arabidopsis T-DNA knockout mutants of SSADH, the ultimate enzyme of the pathway. Four alleles of the ssadh mutation were isolated, and these exhibited a similar phenotype. When exposed to white light (100 μmol of photons per m2 per s), they appear dwarfed with necrotic lesions. Detailed spectrum analysis revealed that UV-B has the most adverse effect on the mutant phenotype, whereas photosynthetic active range light has a very little effect. The ssadh mutants are also sensitive to heat, as they develop necrosis when submitted to such stress. Moreover, both UV and heat cause a rapid increase in the levels of hydrogen peroxide in the ssadh mutants, which is associated with enhanced cell death. Surprisingly, our study also shows that trichomes are hypersensitive to stresses in ssadh mutants. Our work establishes a role for the GABA shunt in preventing the accumulation of reactive oxygen intermediates and cell death, which appears to be essential for plant defense against environmental stress.



Light Spectrum Analysis. WT and ssadh mutant seedlings were germinated and grown under low-fluence white light (WL; 280–700 nm) for 4 weeks (short days) as described above followed by exposure to different irradiation conditions. Seedlings were irradiated for 7 days with Farnell 5-mm/T1¾ untainted clear-lens light-emitting diode rigs supplying either monochromatic blue light (458 nm, 11 μmol·m-2·s-1) or monochromatic red light (660 nm, 70 μmol·m-2·s-1). For UV irradiation, seedlings were exposed to low-fluence (30 μmol·m-2·s-1) or high-fluence (70 μmol·m-2·s-1) photosynthetically active radiation (PAR; 400–700 nm, including UV-Amax 0.45 μmol·m-2·s-1 and UV-Bmax 0.012 μmol·m-2·s-1) alone as a control, and supplemented with low- or high-fluence UV-A (320–400 nm; 4.5 μmol·m-2·s-1 or 11.7 μmol·m-2·s-1) or with low- or high-fluence UV-B (280–320 nm; 0.65 μmol·m-2·s-1 or 3.6 μmol·m-2·s-1) irradiation. UV-A and UV-B were supplied by Philips TL20W/09N and TL20W/01RS fluorescent tubes, respectively. All fluences were measured with a StellarNet EPP2000 fiber optic spectrometer (Tampa, FL).
  



Sensitivity analysis of CDOM spectral slope in artificial and natural samples: an application in the central eastern Mediterranean Basin
Luca Bracchini, Antonio Tognazzi, Arduino Massimo Dattilo, Franco Decembrini, Claudio Rossi and Steven Arthur Loiselle
In the past two decades, optical properties of chromophoric dissolved organic matter (CDOM) in marine environments have been extensively studied. Many of these studies report CDOM properties for the offshore environment where this complex mixture of optically active compounds is strongly diluted. Nevertheless, autochthonous and allochthonous sources have been identified and sinks related to photodegradation and bacterial activity have been demonstrated. The calculation of the spectral slope of the CDOM absorption curve has been proven to be useful and is often reported. However, a rigorous uncertainty analysis of the slope calculation is rarely reported. In this paper, we propose a method to evaluate the uncertainty of CDOM spectral slope calculated between 270 and 400 nm, using both naturally sampled and artificial solutions. We use these results to study the ultra-oligotrophic waters of the Mediterranean Sea (central eastern basin), where little is known about CDOM spatial distribution. We show that dilutions of both artificial and natural samples produce a Gaussian distribution of spectral slopes, indicating that consistent values may be determined, with a typical uncertainty of ±0.0004 nm−1 when absorption at 300 nm was greater then 0.1 m−1 (0.1 m pathlength). Comparing the distribution of spectral slopes from central eastern basin samples to a Gaussian distribution, we show differences between measurements that were significantly different. These values allow us to distinguish possible sources (algal derived CDOM), sinks (e.g. photo-bleaching) at different depths. We propose a subdivision of CDOM compounds into refractory and semilabile/refractory pools and evaluate the CDOM spectral slope of algal derived CDOM released at or near deep chlorophyll maximum. Read more...

Optical Touch Pointer for Fluorescence Guided Glioblastoma Resection Using 5-Aminolevulinic Acid
Neda Haj-Hosseini, MS, Johan Richter, MD, Stefan Andersson-Engels, PhD, and Karin Wardell, PhD- Department of Biomedical Engineering, Linko¨ping University- Department of Neurosurgery, Linkoping University Hospital- Department of Physics, Lund University
Background and Objective: Total tumor resection in patients with glioblastoma multiforme (GBM) is difficult to achieve due to the tumor’s infiltrative way of growing and morphological similarity to the surrounding functioning brain tissue. The diagnosis is usually subjectively performed using a surgical microscope. The objective of this study was to develop and evaluate a hand-held optical touch pointer using a fluorescence spectroscopy system to quantitatively distinguish healthy from malignant brain tissue intraoperatively. Study Design/Materials and Methods: A fluorescence spectroscopy system with pulsed modulation was designed considering optimum energy delivery to the tissue, minimal photobleaching of PpIX and omission of the ambient light background in the operating room (OR). 5-Aminolevulinic acid (5-ALA) of 5 mg/kg body weight was given to the patients with a presumed GBM prior to surgery. During the surgery a laser pulse at 405nm was delivered to the tissue. PpIX in glioblastoma tumor cells assigned with peaks at 635 and 704nm was detected using a fiber optical probe. Results/Conclusion: By using the pulsed fluorescence spectroscopy, PpIXfluorescence isquantitatively detected in the GBM. An effective suppression of low power lamp background from the recorded spectra in addition to a significant reduction of high power surgical lights is achieved.
  



Ablation of Liver Cancer Cells in Vitro by a Plasma Needle
Xianhui Zhang, Maojin Li, Rouli Zhou, Kecheng Feng, and Size Yang-School of Science, Changchun University ofScience and Technology- Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Science- Health Science Center, Department of Cell Biology, Peking University
A plasma needle using a dielectric barrier discharge reactor at atmospheric pressure with a funnel-shaped nozzle was developed. The preliminary characteristics of the plume and applications to the ablation of cultured human hepatocellular carcinoma HCC BEL-7402 cell line were presented. The effect of oxygen, which was injected into argon plasma afterglow region through a steel tube, was studied. The efficiency of argon-oxygen plasma depends sensitively on the oxygen concentration in argon plasma. Large differences between spectra in atmosphere and those in Dulbecco’s modified eagle medium are found. It is found that ultraviolet rays, O, OH, and Ar radicals can reach the bottom of solution and act on HCC cells and there is an optimum input power to get the most radicals.
                                  


Process Monitoring and Quality Control

Semi-Conductor
The MPSS (Multi Probe Spectrophotometer System) is a multi-channel process control monitor used in semi-conductor fabrication and other real-time process applications.

Alcohol
A dual beam process monitor using "Neural Networks" to measure the concentration of alcohol in a process stream.

 Film Deposition
A multi-channel system used to monitor silver film deposition on a moving roll of plastic using transmission and reflectance.

Dilatometer
The "Dilatometer" analytical instrument designed for specifically for polymer chemists.

Colorimeter
A triple-channel SpectroColorimeter used as a process Quality Control monitor for plastic injection molding operations.

StellarNet Patents
A list of patents filed using StellarNet spectrometers
 

 
   
         
 

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